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8
views
Error in UseMethod("filter_") for RIPSeeker package
biomaRt
Bioconductor-RIPSeeker
4 hours ago
Yongqing
• 0
0
votes
0
replies
10
views
How to better run DEXSeq with a very large number of samples?
DEXSeq
7 hours ago
Angel
• 0
0
votes
0
replies
9
views
DESeq2 design formula and batch correction
DESeq2
8 hours ago
lransom
• 0
1
vote
1
reply
32
views
read nanopore Fastq file
NanoporeRNASeq
RNASeq
13 hours ago
sinanoori88
• 0
• updated 11 hours ago
James W. MacDonald
56k
2
votes
3
replies
73
views
error when reading fastq file
FastqCleaner
fastq
ShortRead
1 day ago
sinanoori88
• 0
• updated 13 hours ago
James W. MacDonald
56k
1
vote
1
reply
50
views
News:
SBGNview: Data Analysis, Integration and Visualization on 5000+ Pathways/3000+ Species
SBGNview
pathways
SBGNview.data
pathview
visualization
2 days ago • updated 15 hours ago
Luo Weijun
♦ 1.5k
0
votes
1
reply
22
views
topGo GenTable returns result column as character
GenTable
topGO
18 hours ago
dario.beraldi
• 0
• updated 18 hours ago
James W. MacDonald
56k
0
votes
0
replies
12
views
stageR error - Some genes have only one transcript; this is incompatible with DTU correction. Remove these transcripts.
stageR
DRIMSeq
18 hours ago
sbcn
• 60
0
votes
4
replies
79
views
ribosomeProfilingQC - countReads function - is it possible to consider library type - non-stranded, forward-stranded or rev-stransded?
ribosomeProfilingQC
countReads
5 days ago • updated just now
alexandr.gopanenko
• 20
0
votes
1
reply
44
views
iupac2meme function missing in universalmotif package
universalmotif
8 days ago
lessismore
• 0
• updated 20 hours ago
b2tremblay
• 0
1
vote
1
reply
54
views
An attempt to better understand DESeq2 dispersion estimation
DESeq2
1 day ago
Sam
• 10
• updated 20 hours ago
Michael Love
32k
0
votes
1
reply
48
views
Biological replicates in DESeq2
DESeq2
Bioconductor
RNASeqR
1 day ago
Blanca
• 0
• updated 22 hours ago
ATpoint
• 470
3
votes
1
reply
31
views
How to find rsID with biomaRt in R
biomaRt
23 hours ago
Federica
• 10
• updated 22 hours ago
Mike Smith
♦ 4.9k
0
votes
3
replies
83
views
Same methylation probe ID with different locus annotations in Illumina 27k and 450k plotforms
IlluminaHumanMethylation27kanno.ilmn12.hg19
3 days ago
yuabrahamliu
• 0
• updated 18 minutes ago
Kevin Blighe
2.5k
2
votes
4
replies
110
views
Using edgeR and a spike-in to calculate absolute abundance
edgeR
SpikeIn
RNASeq
5 days ago • updated 17 hours ago
robert.chen
• 0
1
vote
4
replies
159
views
Error when launching Shiny app in package sangeranalyseR
sangeranalyseR
sanger
5 months ago
dh.heredero
• 10
• updated 12 hours ago
silonovsa25
• 0
0
votes
3
replies
1.8k
views
DESeq2 library loading error
deseq2
2.7 years ago
smartdogs4chris
• 0
• updated 18 hours ago
krushnach80
• 0
17 results • Page
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Recent ...
Replies
Comment: ribosomeProfilingQC - countReads function - is it possible to consider library
by
alexandr.gopanenko
• 20
Hi Jianhong, Thank you very much for your response! I will try it soon! Best regards, Alexandr
Comment: Same methylation probe ID with different locus annotations in Illumina 27k and 4
by
Kevin Blighe
2.5k
I am admittedly not sure, but can only assume that Illumina, through experimentation, concluded that these probes had greater affinity for …
Answer: read nanopore Fastq file
by
James W. MacDonald
56k
You don't say what you want to do once you read it in. But anyway. ``` > library(Biostrings) ## I modified the FASTQ file in the Short…
Comment: Error when launching Shiny app in package sangeranalyseR
by
silonovsa25
• 0
Hi everyone, There are any variants to solve this mistake?
Answer: error when reading fastq file
by
James W. MacDonald
56k
If you have 'U' in your FASTQ files I think that will be a problem. I can barely understand C code, but in `read_solexa_fastq` it says `…
Votes
Answer: read nanopore Fastq file
Answer: error when reading fastq file
Error when launching Shiny app in package sangeranalyseR
Answer: DiffBind analysis for ATAC-Seq error Error processing one or more read files
Answer: DiffBind analysis for ATAC-Seq error Error processing one or more read files
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