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21
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News: SBGNview: Data Analysis, Integration and Visualization on 5000+ Pathways/3000+ Species
SBGN SBGNview pathways pathview visualization
6 hours ago Luo Weijun ♦ 1.5k
0
votes
1
reply
27
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Diffbind error while running example data
DiffBind
13 hours ago Lucky • 0 • updated 10 hours ago Rory Stark ♦ 3.6k
1
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3
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71
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Best way to handle tags of bam files
GenomicAlignments bam Rsamtools
2 days ago • updated 11 hours ago changxu.fan • 0
0
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8
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63
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problem installing ENmix package
ENmix Bioconductor rtracklayer
12 hours ago lea • 0 • updated 5 hours ago James W. MacDonald 56k
0
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0
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19
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How to get illumina CpG IDs by gene name?
MethylationArrayData RnBeads
14 hours ago D • 0
0
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1
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43
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Can you colour dendrogram branch clusters in pheatmap?
R heatmaps pheatmap
1 day ago trichorico • 10 • updated 15 hours ago Kevin Blighe 2.5k
2
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1
reply
37
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Splitting multiple groups - three different ages
DESeq2
1 day ago jd348 • 0 • updated 15 hours ago Michael Love 32k
0
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2
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50
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Same methylation probe ID with different locus annotations in Illumina 27k and 450k plotforms
IlluminaHumanMethylation27kanno.ilmn12.hg19
1 day ago • updated 1 hour ago yuabrahamliu • 0
0
votes
1
reply
29
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DESeq2, tximport normalization, normalization factors, size factors
tximport DESeq2 normalizationfactors sizefactors
16 hours ago svenbioinf • 0 • updated 15 hours ago Michael Love 32k
2
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4
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63
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Removing rows (countData) from a DESeq Object
DESeq2
18 hours ago • updated 17 hours ago Bine • 0
1
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5
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992
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DiffBind dba.report() output: Is "concentration" normalized?
DiffBind
3.8 years ago roman.hillje • 0 • updated 9 hours ago amwa • 0
11 results • Page 1 of 1
Recent ...
Replies
Comment: Same methylation probe ID with different locus annotations in Illumina 27k and 4 by yuabrahamliu • 0
Thank you for the reply Kevin. I further checked the sequences of the probes and found something noteworthy. For the 27k package, the seque…
Comment: problem installing ENmix package by James W. MacDonald 56k
Will you give the full output that you get when installing?
Comment: problem installing ENmix package by lea • 0
I tried both (with the slashes the other way around), it did not work but I delete the package directly on my file browser and it correctly…
Comment: problem installing ENmix package by James W. MacDonald 56k
Ugh. You need to convert the back slashes in the call to `unlink` to forward slashes or R will get all huffy with you.
Comment: problem installing ENmix package by James W. MacDonald 56k
Ah, that explains it. When R installs a package, it first creates a directory in your library dir called 00LOCK and does a preliminary inst…
Votes
Comment: DMRcate extractRanges error
Comment: Does hashedDrops support 'imbalanced' combinations of HTOs?
SBGNview: Data Analysis, Integration and Visualization on 5000+ Pathways/3000+ Species
A: Minfi issue: return code from pthread_create() is 22
Answer: DiffBind fragmentSize meaning
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