0
votes
1
answer
60
views
1
answer
Best csaw normalization approach for ATAC-seq data
csaw written 26 days ago by Lucy0 • updated 12 days ago by Aaron Lun21k
3
votes
1
answer
62
views
1
answer
0
votes
1
answer
67
views
1
answer
How to interpret WGCNA exported result?
wgcna written 16 days ago by bgtamang0 • updated 16 days ago by Peter Langfelder1.5k
0
votes
1
answer
102
views
1
answer
0
votes
1
answer
61
views
1
answer
0
votes
1
answer
62
views
1
answer
Batch effect correction for class detection
batch effect unsupervised written 25 days ago by kentfung0 • updated 25 days ago by James W. MacDonald47k
2
votes
1
answer
79
views
1
answer
1
vote
1
answer
104
views
1
answer
3
votes
1
answer
80
views
1
answer
1
vote
1
answer
57
views
1
answer
Problem installing ChAMP package.
microarray champ methylation software error written 26 days ago by cawten10 • updated 26 days ago by Martin Morgan ♦♦ 22k
2
votes
1
answer
46
views
1
answer
DESeq2 error with lfcshrink for interaction term
deseq2 interaction term written 7 days ago by Cece0 • updated 6 days ago by Michael Love19k
3
votes
1
answer
83
views
1
answer
EdgeR vs DESeq2 with/without lfcShrink
edger and deseq2 written 7 days ago by Akula, Nirmala NIH/NIMH [C]180 • updated 6 days ago by Aaron Lun21k
0
votes
1
answer
53
views
1
answer
0
votes
1
answer
92
views
1
answer
2
votes
1
answer
125
views
1
answer
0
votes
1
answer
60
views
1
answer
mroast/fry with gene weights for most or all genes
limma mroast fry written 8 days ago by maltethodberg100 • updated 2 days ago by Gordon Smyth35k
1
vote
1
answer
102
views
1
answer
1
vote
1
answer
61
views
1
answer
Subsetting GRanges objext
granges subsetting written 29 days ago by lalchungnungabt170 • updated 29 days ago by James W. MacDonald47k
1
vote
1
answer
142
views
1
answer
2
votes
1
answer
40
views
1
answer
DESeq2: maxCooks not set (NA)
deseq2 dds cooks distance written 11 days ago by ipso0 • updated 11 days ago by Michael Love19k
1
vote
1
answer
63
views
1
answer
0
votes
1
answer
48
views
1
answer
DESeq2 design model that considers 3 factors
deseq2 multiple factor design written 13 days ago by sandra0 • updated 12 days ago by Michael Love19k
2
votes
1
answer
75
views
1
answer
1
vote
1
answer
52
views
1
answer
CSAW ready to use R script
csaw written 11 days ago by polaxgr10 • updated 11 days ago by Aaron Lun21k
0
votes
1
answer
36
views
1
answer
Unbalanced experimental design of DESeq2
deseq2 written 7 days ago by shengqh0 • updated 7 days ago by Michael Love19k
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