2
votes
1
answer
81
views
1
answer
DESeq2 results export padj sorted
deseq deseq2 differential binding analysis written 2 days ago by rbronste50 • updated 2 days ago by Michael Love15k
0
votes
1
answer
60
views
1
answer
Data object format for deseq2
deseq2 R rsem written 3 days ago by tim.ivanov.920 • updated 2 days ago by Michael Love15k
0
votes
1
answer
59
views
1
answer
1
vote
1
answer
75
views
1
answer
scater/scran with TPMs from Salmon - counts?
salmon scran scater written 3 days ago by nk0 • updated 2 days ago by Aaron Lun18k
0
votes
1
answer
215
views
1
answer
Error in pairwiseAlignment when considering an empty seuqnece
biostrings written 19 months ago by kristoffer.vittingseerup20 • updated 2 days ago by Hervé Pagès ♦♦ 13k
2
votes
1
answer
96
views
1
answer
0
votes
1
answer
64
views
1
answer
how to read htseq-count
edger htseqcounts written 2 days ago by Bioinformatics20 • updated 2 days ago by Gordon Smyth32k
1
vote
1
answer
53
views
1
answer
sample removal after clustering
deseq2 rlog transformation written 2 days ago by tarun20 • updated 2 days ago by Michael Love15k
2
votes
1
answer
53
views
1
answer
1
vote
1
answer
68
views
1
answer
Error in reading ballgown object
R ballgown written 6 days ago by amy160 • updated 4 days ago by Alyssa Frazee120
0
votes
1
answer
66
views
1
answer
Multiple pairwise comparisons in ballgown
ballgown written 8 days ago by rachael.detar0 • updated 4 days ago by Alyssa Frazee120
0
votes
1
answer
65
views
1
answer
Error in useMart while using a dataset in biomaRt
annotation celegans biomart bioconductor written 5 days ago by clarisbaby0 • updated 5 days ago by Mike Smith2.2k
1
vote
1
answer
64
views
1
answer
What do you do with the DESeq2 NA results ?. How do you manage them ?
deseq2 na values written 5 days ago by arfranco120 • updated 5 days ago by Michael Love15k
0
votes
1
answer
60
views
1
answer
0
votes
1
answer
38
views
1
answer
1
vote
1
answer
57
views
1
answer
biomaRt encoding - string char expected
biomart encoding written 2 days ago by TriS200 • updated 1 day ago by Mike Smith2.2k
0
votes
1
answer
85
views
1
answer
0
votes
1
answer
51
views
1
answer
1
vote
1
answer
71
views
1
answer
DiffBind does not run in parallel
diffbind biocparallel parallel written 1 day ago by eggrandio0 • updated 1 day ago by Rory Stark2.2k
0
votes
1
answer
35
views
1
answer
1
vote
1
answer
103
views
1
answer
object 'feaMeasurements' not found for MSstats
R msstats written 5 weeks ago by doomloop110 • updated 1 day ago by thx2230
0
votes
1
answer
28
views
1
answer
DiffBind MA plot
diffbind maplot written 1 day ago by grundelphine0 • updated 1 day ago by Rory Stark2.2k
0
votes
1
answer
86
views
1
answer
0
votes
1
answer
74
views
1
answer
Use interactions to get the difference in the effect of two treatments
deseq2 written 6 days ago by rrcutler30 • updated 4 days ago by Michael Love15k
0
votes
1
answer
49
views
1
answer
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