10
votes
1
answer
167
views
1
answer
SummarizedExperiment object from GEOquery obtained GSE
geoquery summarizedexperiment matrix geo written 17 days ago by rbronste50 • updated 15 days ago by Sean Davis21k
1
vote
1
answer
163
views
1
answer
0
votes
1
answer
162
views
1
answer
0
votes
0
answers
161
views
0
answers
1
vote
1
answer
160
views
1
answer
arrayQualityMetrics: "intgroup" error, groups dropped from x$pData.
arrayqualitymetrics R written 29 days ago by abf0 • updated 29 days ago by Mike Smith2.2k
0
votes
0
answers
159
views
0
answers
0
votes
0
answers
158
views
0
answers
2
votes
1
answer
158
views
1
answer
humann2 output appropriate for EdgeR or DESeq2 analysis
edger deseq2 written 28 days ago by nyoungb20 • updated 28 days ago by Aaron Lun18k
0
votes
1
answer
154
views
1
answer
2
votes
1
answer
154
views
1
answer
1
vote
1
answer
153
views
1
answer
coef funcition execept for pvalues
deseq2 written 29 days ago by kieran.mace10 • updated 29 days ago by Michael Love15k
0
votes
1
answer
152
views
1
answer
0
votes
1
answer
151
views
1
answer
XCMS not working
xcms package written 26 days ago by nathan.wamer0 • updated 26 days ago by James W. MacDonald45k
2
votes
2
answers
150
views
2
answers
fdrtool - How does it work?
deseq2 fdrtool written 5 weeks ago by rrcutler30
0
votes
1
answer
150
views
1
answer
error when using ensembldb with a MySQL server
rmysql ensembldb written 20 days ago by Didi10 • updated 20 days ago by James W. MacDonald45k
0
votes
2
answers
144
views
2
answers
0
votes
1
answer
144
views
1
answer
problem installing S.cerevisiae genome
software error written 26 days ago by ealopera0 • updated 26 days ago by Martin Morgan ♦♦ 21k
2
votes
1
answer
144
views
1
answer
3
votes
1
answer
143
views
1
answer
cummeRbund installation fails
genomicfeatures cummerbund software error bioconductor written 4 weeks ago by slanyrobert30 • updated 27 days ago by Martin Morgan ♦♦ 21k
4
votes
1
answer
143
views
1
answer
breakTies for a Hits-object based on value in mcols?
s4vectors hits written 29 days ago by maltethodberg40 • updated 29 days ago by Michael Lawrence9.8k
0
votes
1
answer
139
views
1
answer
0
votes
2
answers
138
views
2
answers
Subsetting an EList Object doesn't subset $sample.weights
limma voom elist written 4 weeks ago by Steve Pederson60 • updated 28 days ago by Gordon Smyth32k
2
votes
0
answers
137
views
5 follow
0
answers
0
votes
1
answer
136
views
1
answer
Base mean count threshold
deseq2 base written 24 days ago by lirongrossmann0 • updated 15 days ago by Michael Love15k
0
votes
0
answers
133
views
0
answers
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