14
votes
6
answers
1.6k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 22 months ago by florian.noack60 • updated 11 weeks ago by Rory Stark2.2k
2
votes
1
answer
1.6k
views
1
answer
DESeq2, plotting residuals vs.fitted values
deseq2 written 3.5 years ago by Mike Miller70 • updated 11 months ago by Michael Love15k
9
votes
2
answers
1.6k
views
2
answers
9
votes
2
answers
1.5k
views
5 follow
2
answers
What to use: PCA or tSNE dimension reduction in DESeq2 analysis?
rnaseq deseq2 pca tsne written 6 months ago by s.w.vanderlaan20 • updated 6 months ago by Kushal K Dey10
7
votes
1
answer
1.5k
views
1
answer
2
votes
2
answers
1.4k
views
5 follow
2
answers
3
votes
1
answer
1.4k
views
1
answer
17
votes
2
answers
1.4k
views
7 follow
2
answers
Limma camera function never gives any differentially expressed gene sets
limma written 2.5 years ago by chris86340 • updated 5 months ago by misterrandyclark0
0
votes
2
answers
1.3k
views
2
answers
Error in installing Gviz
written 4.3 years ago by 马磊10 • updated 8 months ago by Sameet Mehta20
2
votes
3
answers
1.3k
views
3
answers
problem with cummeRbund using latest R version
cummerbund written 5 months ago by mmateos0 • updated 4 months ago by serenaspartano0
0
votes
1
answer
1.3k
views
1
answer
0
votes
2
answers
1.2k
views
2
answers
40
votes
3
answers
1.2k
views
3
answers
0
votes
0
answers
1.2k
views
0
answers
5
votes
2
answers
1.2k
views
2
answers
0
votes
1
answer
1.2k
views
1
answer
Limma - RNA-Seq DE genes - Quantile normalized log transformed RPKM data
limma written 6.1 years ago by Avinash S40 • updated 7 months ago by Gordon Smyth32k
0
votes
2
answers
1.1k
views
2
answers
Error while processing BAM file with Picard FixMateInformation
diffhic written 2.2 years ago by koustav.pal0 • updated 8 weeks ago by geryk.jan0
1
vote
1
answer
1.1k
views
1
answer
0
votes
3
answers
1.1k
views
7 follow
3
answers
error in SRAdb
sradb written 3.5 years ago by Faryabi, Robert NIH/NCI [F]30 • updated 3 months ago by djlemas0
4
votes
0
answers
1.1k
views
0
answers
3
votes
2
answers
1.1k
views
2
answers
8
votes
2
answers
1.1k
views
5 follow
2
answers
Differential expression analysis starting from TPM data
R tpm written 5 months ago by cahidora20 • updated 5 months ago by Gordon Smyth32k
2
votes
2
answers
1.1k
views
2
answers
8
votes
6
answers
1.1k
views
6
answers
0
votes
5
answers
1.0k
views
7 follow
5
answers
package 'ChAMP' demo/test code fails at champ.CNA()
software error written 3.0 years ago by Hamid Bolouri90 • updated 12 months ago by Yuan Tian70
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