0
votes
0
answers
23
views
0
answers
0
votes
1
answer
43
views
1
answer
A problem in using Combat
sva combat written 25 days ago by linw0 • updated 23 days ago by W. Evan Johnson760
0
votes
1
answer
27
views
1
answer
comparing 2 long BED files in R in an efficient way
vcf bed written 20 days ago by Bogdan490 • updated 19 days ago by GENOMIC_region0
0
votes
0
answers
26
views
0
answers
2
votes
3
answers
538
views
3
answers
DMRcate results cg ID of significant DMR
dmrcate written 2.1 years ago by Giovanni Calice150 • updated 15 days ago by 5742338290
6
votes
1
answer
124
views
1
answer
0
votes
1
answer
43
views
1
answer
single cell RNA-seq pipeline
rnaseq scrna-seq written 4 days ago by Bogdan490 • updated 4 days ago by Aaron Lun20k
3
votes
1
answer
65
views
1
answer
0
votes
0
answers
44
views
0
answers
0
votes
0
answers
18
views
0
answers
News: Ensembl 93 is out!
biomart news ensembl mart ensembl93 written 4 days ago by amonida20
0
votes
1
answer
48
views
1
answer
1
vote
1
answer
62
views
1
answer
Global expression shift using RUVSeq
rnaseq normalization ruvseq differential expression written 11 days ago by Leon0 • updated 9 days ago by davide risso740
3
votes
2
answers
1.4k
views
2
answers
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
rnaseq deseq2 written 3.2 years ago by anpham0 • updated 16 days ago by ta_awwad10
0
votes
0
answers
29
views
0
answers
1
vote
1
answer
53
views
1
answer
edgeR: problem with the quasi-likelihood F-test
edger glmqlftest written 24 days ago by Estel Kitsune0 • updated 24 days ago by Aaron Lun20k
0
votes
1
answer
33
views
1
answer
Problem with coefficients that are not estimable (limma)
limma batch effect written 3 days ago by rrm380 • updated 3 days ago by Aaron Lun20k
2
votes
1
answer
130
views
1
answer
Package is not available for R version 3.5.0
qvalue nbpseq written 27 days ago by Gary0 • updated 27 days ago by Gordon Smyth34k
0
votes
1
answer
66
views
1
answer
limma removeBatchEffect -- strange values in presence of NAs
limma removebatcheffect() written 18 days ago by jf10 • updated 17 days ago by Gordon Smyth34k
2
votes
2
answers
59
views
2
answers
Differential ChIP-seq analysis
diffbind csaw written 16 days ago by bioinfo0 • updated 15 days ago by Rory Stark2.5k
0
votes
0
answers
34
views
0
answers
1
vote
1
answer
48
views
1
answer
0
votes
1
answer
61
views
1
answer
Error in Apeglm Method for Effect Size Shrinkage
deseq2 apeglm written 19 days ago by rbenel0 • updated 19 days ago by Michael Love18k
0
votes
0
answers
79
views
0
answers
1
vote
1
answer
81
views
1
answer
could not find function "DESeqDataSetFromMatrix
deseq2 written 25 days ago by dastjerdi19740 • updated 25 days ago by Axel Klenk920
1
vote
0
answers
43
views
0
answers
visualize Hi-C .cool file in R
hitc hi-c written 5 days ago by ta_awwad10
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