1
vote
1
answer
68
views
1
answer
0
votes
1
answer
46
views
1
answer
Counting exonic and intronic reads for differential gene expression
deseq2 intron written 6 days ago by Mthabisi Moyo10 • updated 6 days ago by Malcolm Cook1.5k
0
votes
1
answer
63
views
1
answer
3
votes
1
answer
110
views
1
answer
"RNASeqWorkflow" package development question
package development written 6 days ago by ntueeb05howard0 • updated 6 days ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
32
views
0
answers
0
votes
1
answer
41
views
1
answer
0
votes
1
answer
54
views
1
answer
Limma analysis combining twins pairs and unpaired controls
rnaseq limma twin analysis written 8 days ago by kalletrontti0 • updated 7 days ago by Aaron Lun21k
1
vote
1
answer
39
views
1
answer
quantify() method for MSnExp to MSnSet for MS1 level data only
msnbase spectrum written 8 days ago by dgemoets0 • updated 8 days ago by Laurent Gatto1.0k
0
votes
1
answer
77
views
1
answer
Dealing with low read count in early time point samples
deseq2 written 9 days ago by xei60 • updated 8 days ago by Michael Love19k
1
vote
1
answer
64
views
1
answer
2
votes
1
answer
73
views
1
answer
Visualise and remove batch effects in DESeq2
rnaseq deseq2 written 8 days ago by Tash.0 • updated 8 days ago by Michael Love19k
0
votes
0
answers
53
views
0
answers
Vidger library error
vidger written 8 days ago by sbbinfo900
0
votes
1
answer
48
views
1
answer
Visualization of analysis of multiple cell lines
limma plotmds cell lines written 9 days ago by Alexander Az.0 • updated 8 days ago by Gordon Smyth35k
0
votes
0
answers
58
views
0
answers
0
votes
1
answer
51
views
1
answer
Extracting normalized count data from DESeq2
deseq2 written 8 days ago by banerjee.deblina0 • updated 8 days ago by Michael Love19k
4
votes
1
answer
79
views
1
answer
0
votes
1
answer
45
views
1
answer
5
votes
1
answer
57
views
1
answer
2
votes
1
answer
126
views
1
answer
0
votes
0
answers
54
views
0
answers
8
votes
1
answer
63
views
1
answer
2
votes
1
answer
83
views
1
answer
EdgeR analysis batch effect
edger differential gene expression written 10 days ago by rfenouil0 • updated 10 days ago by Aaron Lun21k
3
votes
1
answer
85
views
1
answer
EdgeR vs DESeq2 with/without lfcShrink
edger and deseq2 written 11 days ago by Akula, Nirmala NIH/NIMH [C]180 • updated 10 days ago by Aaron Lun21k
0
votes
1
answer
61
views
1
answer
2
votes
0
answers
72
views
0
answers
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