15
votes
3
answers
6.4k
views
14 follow
3
answers
New function lfcShrink() in DESeq2
deseq2 written 17 months ago by Michael Love19k
17
votes
0
answers
4.3k
views
11 follow
0
answers
Tutorial: Bioconductor on Coursera
tutorial mooc written 3.1 years ago by Kasper Daniel Hansen6.4k • updated 6 months ago by ifmrdatascience0
14
votes
6
answers
2.4k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 2.6 years ago by florian.noack60 • updated 11 months ago by Rory Stark2.5k
17
votes
1
answer
372
views
6 follow
1
answer
How to check the read length for all the TCGA data samples in GDC?
tcga wes gdc gdc data written 6 months ago by Biologist70 • updated 6 months ago by Sean Davis21k
2
votes
0
answers
391
views
5 follow
0
answers
6
votes
2
answers
4.9k
views
8 follow
2
answers
remove microarray batch effects using Limma
microarray written 8.0 years ago by Xie, Zhi NIH/NHLBI [E]60 • updated 12 months ago by Gordon Smyth35k
6
votes
1
answer
2.7k
views
7 follow
1
answer
biomaRt: error using useDataset or useMart
biomart software error usemart usedataset written 10 months ago by lpsantamaria40 • updated 10 months ago by Mike Smith2.9k
4
votes
2
answers
341
views
7 follow
2
answers
Incredibly high/low foldChange
deseq2 written 7 months ago by jovel_juan10
3
votes
0
answers
138
views
5 follow
0
answers
2
votes
0
answers
136
views
5 follow
0
answers
1
vote
1
answer
161
views
1
answer
MEDIP: Problem with MEDIPS.createSet
bsgenome medips medip-seq written 7 months ago by vjain0 • updated 7 months ago by Lukas Chavez470
4
votes
0
answers
280
views
0
answers
3
votes
1
answer
166
views
1
answer
2
votes
1
answer
159
views
1
answer
2
votes
1
answer
503
views
1
answer
2
votes
1
answer
97
views
1
answer
accounting for technical variation in DESEQ2
normalization deseq2 written 10 weeks ago by marco.trizzino8310 • updated 10 weeks ago by Peter Langfelder1.6k
5
votes
2
answers
148
views
7 follow
2
answers
4
votes
1
answer
139
views
1
answer
14
votes
1
answer
267
views
5 follow
1
answer
7
votes
1
answer
122
views
1
answer
3
votes
1
answer
377
views
1
answer
3
votes
1
answer
234
views
1
answer
3
votes
0
answers
109
views
0
answers
DEXSeq analysis with large number of samples
dexseq estimatedispersions written 12 weeks ago by nemanja.vucic10 • updated 12 weeks ago by Michael Love19k
1
vote
1
answer
48
views
1
answer
DESeq2 for large de novo transcripts assembly
deseq2 written 1 day ago by Emiliano Canton10 • updated 1 day ago by Michael Love19k
3
votes
1
answer
1.2k
views
1
answer
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