3
votes
2
answers
2.7k
views
2
answers
Heatmap Plotting in R
R bioconductor heatmap written 21 months ago by Deepak Tanwar10
0
votes
1
answer
1.8k
views
1
answer
Limma, SAM and Fold Change Calculation
affy limma gcrma siggenes written 9.8 years ago by Peter White70 • updated 25 days ago by Gordon Smyth30k
1
vote
1
answer
1.4k
views
1
answer
1
vote
2
answers
839
views
2
answers
Ballgown up and down regulated genes
differential expression ballgown written 15 months ago by psbpedrobarbosa0 • updated 2 days ago by kapeelc0
25
votes
6
answers
791
views
13 follow
6
answers
[FIXED] Error in Gviz (actually, rtracklayer) | IdeogramTrack
rtracklayer gviz written 9 weeks ago by Ramiro Magno60 • updated 3 days ago by guifengwei0
1
vote
1
answer
599
views
1
answer
EdgeR 'average' cpm
edger written 4.1 years ago by Anna Esteve Codina20 • updated 20 days ago by Gordon Smyth30k
2
votes
1
answer
334
views
5 follow
1
answer
GOseq: count bias correction variations?
coverage goseq written 2.7 years ago by Christopher Conley40 • updated 9 days ago by Gordon Smyth30k
0
votes
0
answers
261
views
0
answers
0
votes
1
answer
249
views
1
answer
0
votes
1
answer
233
views
1
answer
Normalization of specificity level (level of depth) of GO terms dataset
gosemsim gosim written 18 months ago by s.apocarpum0 • updated 26 days ago by LluĂ­s R210
0
votes
3
answers
219
views
3
answers
raw probe set expression data and masking questions
normalization cancer probe affy process written 10.6 years ago by Schwartz, Donald20 • updated 28 days ago by jacorvar20
4
votes
4
answers
213
views
4
answers
Error in getBM of biomaRt package
biomart getbm written 11 weeks ago by rubi70 • updated 22 days ago by boris.steipe0
0
votes
0
answers
202
views
0
answers
4
votes
2
answers
192
views
2
answers
7
votes
1
answer
179
views
1
answer
biomaRt error when connecting to host
biomart connection host written 15 days ago by Assa Yeroslaviz1.3k • updated 15 days ago by Mike Smith1.7k
3
votes
1
answer
171
views
1
answer
standard error value (lfcSE) returned by DeSeq2
deseq deseq2 standard error lfc lfcse written 6 weeks ago by tootiki0 • updated 17 days ago by rraadd_80
5
votes
2
answers
170
views
2
answers
Classes and methods for working with segmented copy number data
cgh copynumber written 8 months ago by Sean Davis20k • updated 21 days ago by Marcel Ramos ♦♦ 50
5
votes
2
answers
169
views
2
answers
News: Ensembl 88 is out!
biomart news ensembl ensembl mart e!88 written 27 days ago by Thomas Maurel680
3
votes
1
answer
166
views
1
answer
3
votes
2
answers
165
views
2
answers
0
votes
1
answer
155
views
1
answer
4
votes
2
answers
153
views
2
answers
4
votes
1
answer
145
views
1
answer
Clustering differential expression results from voomWithQualityWeights
limma edger rna rsem written 12 days ago by hrishi27n0 • updated 10 days ago by Gordon Smyth30k
2
votes
1
answer
144
views
1
answer
0
votes
2
answers
143
views
2
answers
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