0
votes
2
answers
3.0k
views
2
answers
remove microarray batch effects using Limma
microarray written 6.9 years ago by Xie, Zhi NIH/NHLBI [E]20 • updated 11 days ago by Gordon Smyth31k
13
votes
4
answers
2.9k
views
7 follow
4
answers
Removing continuous covariate effects in limma analysis
microarray limma written 2.5 years ago by Pauly Lin50 • updated 11 days ago by Gordon Smyth31k
8
votes
10
answers
2.2k
views
15 follow
10
answers
readCufflinks problem with extdata
cummerbund written 12 weeks ago by biakemi20 • updated 16 days ago by sdhutchins0
0
votes
1
answer
1.8k
views
1
answer
removeBatchEffect options: design and covariates
limma removebatcheffect written 3.1 years ago by Rao,Xiayu530 • updated 11 days ago by Gordon Smyth31k
10
votes
1
answer
1.5k
views
5 follow
1
answer
2
votes
3
answers
795
views
3
answers
problem with cummeRbund using latest R version
cummerbund written 8 weeks ago by mmateos0 • updated 2 days ago by serenaspartano0
0
votes
2
answers
608
views
2
answers
makeTxDbFromGFF Error: subscript contains NAs
genomicfeatures granges maketxdbfromgff written 9 weeks ago by marc_bes0 • updated 24 days ago by Hervé Pagès ♦♦ 12k
14
votes
0
answers
539
views
0
answers
News: Bioconductor packages now each have a DOI.
news citation doi written 4 weeks ago by Sean Davis20k • updated 15 days ago by Martin Morgan ♦♦ 20k
1
vote
1
answer
482
views
1
answer
11
votes
3
answers
456
views
3
answers
edgeR - MDS Plot for Count Data
edger plot mds deg written 5 weeks ago by baus870
0
votes
12
answers
433
views
12
answers
0
votes
1
answer
425
views
1
answer
1
vote
1
answer
393
views
1
answer
IRanges (GRanges): Inconsistent behaviour when overlapping ranges of width 0
iranges granges written 5 weeks ago by balwierz40 • updated 17 days ago by Hervé Pagès ♦♦ 12k
0
votes
1
answer
377
views
1
answer
Does SC3 correct counts for gene length?
rna-seq single-cell scater sc3 biclustering written 5 weeks ago by rmf0 • updated 19 days ago by Vladimir Kiselev100
0
votes
4
answers
374
views
4
answers
pcaEcplorer PCA2go function crashing
pcaexplorer pca2go written 5 weeks ago by reubenmcgregor880 • updated 24 days ago by Federico Marini90
0
votes
2
answers
371
views
2
answers
Searching for packages for normalizing Metabolomic data
preprocessing written 6.8 years ago by nqueralt@clinic.ub.es60 • updated 29 days ago by hemi.luan0
3
votes
0
answers
370
views
0
answers
2
votes
1
answer
366
views
1
answer
8
votes
0
answers
358
views
0
answers
0
votes
0
answers
358
views
0
answers
0
votes
1
answer
350
views
1
answer
ggtree: time-scaled tree s
ggtree phylogenetic calibration fossils times-scale written 4 weeks ago by aelgorriaga0 • updated 23 days ago by Guangchuang Yu700
0
votes
2
answers
340
views
2
answers
2
votes
2
answers
335
views
2
answers
Diffbind: dba.plot retrieve variance explained
diffbind chipqc written 4 weeks ago by ZheFrench10 • updated 11 days ago by Rory Stark2.0k
2
votes
1
answer
335
views
1
answer
DiffBind contrasts issue
chipseq diffbind written 4 weeks ago by rbronste10 • updated 24 days ago by Rory Stark2.0k
0
votes
1
answer
328
views
1
answer
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