6
votes
5
answers
1.9k
views
5
answers
edgeR time series analysis with no replicates
edger written 4.1 years ago by sirintra10 • updated 3 days ago by owuorerick0
0
votes
2
answers
41
views
2
answers
5
votes
2
answers
114
views
7 follow
2
answers
1
vote
2
answers
77
views
2
answers
Error in running ATACseqQC
software error written 7 days ago by Fei Liu0 • updated 4 days ago by Ou, Jianhong1.1k
0
votes
2
answers
196
views
2
answers
3
votes
2
answers
110
views
2
answers
Error in creating BSGenome package
bsgenome written 8 days ago by zen0 • updated 12 hours ago by James W. MacDonald51k
0
votes
1
answer
35
views
1
answer
0
votes
1
answer
31
views
1
answer
2
votes
1
answer
63
views
1
answer
Batch Corrections (MNN) with TPM values
rna-seq scran scater scrna-seq mnn written 4 days ago by hamza_karakurt30 • updated 4 days ago by Aaron Lun25k
2
votes
1
answer
121
views
1
answer
2
votes
1
answer
170
views
1
answer
0
votes
1
answer
54
views
1
answer
change values on Differential Expression parameters
splatter written 3 days ago by jp37700 • updated 3 days ago by luke.zappia50
0
votes
1
answer
51
views
1
answer
tximeta link to transcriptome
deseq2 written 2 days ago by eric.blanc0 • updated 2 days ago by Michael Love25k
2
votes
1
answer
46
views
1
answer
"adding gene annotations" in edgeR doesn't work with select()
edger deg written 2 days ago by mjavad20120 • updated 2 days ago by James W. MacDonald51k
0
votes
1
answer
36
views
1
answer
1
vote
1
answer
48
views
1
answer
Difference in PCA variance calculation in DESeq2
deseq2 hclust pca written 1 day ago by ag1805x20 • updated 1 day ago by Michael Love25k
0
votes
1
answer
22
views
1
answer
DiffBind with paired-end ChIP-seq data
software error written 1 day ago by shen_0 • updated 1 day ago by James W. MacDonald51k
0
votes
1
answer
19
views
1
answer
1
vote
1
answer
42
views
1
answer
Differential gene expression analysis
deseq2 written 1 day ago by rthapa0 • updated 1 day ago by Michael Love25k
1
vote
1
answer
48
views
1
answer
write.table of DESeq2 results broken down by LFC
deseq2 written 1 day ago by rbronste60 • updated 1 day ago by Michael Love25k
3
votes
1
answer
27
views
1
answer
Are AH52264, AH66175, and AH70594 duplicates?
annotationhub written 20 hours ago by Aditya120 • updated 18 hours ago by shepherl ♦♦ 1.6k
0
votes
1
answer
31
views
1
answer
DESeq2 analysis with multiple factors
deseq2 deg multiplefactors written 21 hours ago by yura.song0 • updated 15 hours ago by Michael Love25k
0
votes
1
answer
16
views
1
answer
DESeq2 installation issue
deseq2 written 14 hours ago by eric.trezel0 • updated 13 hours ago by Martin Morgan ♦♦ 23k
1
vote
1
answer
36
views
1
answer
How to filter out low read counts
summarizedexperiment written 14 hours ago by annkolman780 • updated 13 hours ago by Martin Morgan ♦♦ 23k
0
votes
0
answers
26
views
0
answers
Pathviews for DE list of genes
rnaseq pathway analysis pathviews written 1 day ago by sofia.lundahl0 • updated 1 day ago by Michael Love25k
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