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17
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deseq2 written 22 months ago by Michael Love22k
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15
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3
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Nanostring analysis with limma
limma nanostring written 3.9 years ago by mali salmon340 • updated 3.9 years ago by ker6110
10
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CAMERA error: $ operator not defined for this S4 class
camera software error written 3.7 years ago by scott.walmsley60 • updated 3.7 years ago by ckuhl20
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using duplicateCorrelation with limma+voom for RNA-seq data
limma voom written 4.8 years ago by John Blischak150 • updated 3.8 years ago by Gordon Smyth36k
11
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remove microarray batch effects using Limma
microarray written 8.4 years ago by Xie, Zhi NIH/NHLBI [E]80 • updated 17 months ago by Gordon Smyth36k
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DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design written 3.9 years ago by kmu00440 • updated 3.9 years ago by Michael Love22k
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4
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5.5k
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12 follow
4
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Removing continuous covariate effects in limma analysis
microarray limma written 4.0 years ago by Pauly Lin80 • updated 18 months ago by Gordon Smyth36k
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WGCNA: overlapping colors in plotDendroAndColors?
network wgcna plotdendroandcolors written 4.5 years ago by Keith Hughitt120 • updated 4.5 years ago by Peter Langfelder1.8k
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DESeq2 output explanation
deseq deseq2 written 4.3 years ago by francesca.defilippis60 • updated 4.3 years ago by Michael Love22k
7
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Renaming the seqlevels in a transcript database from GenomicFeatures
genomicfeatures written 4.7 years ago by Fong Chun Chan320 • updated 4.7 years ago by Sonali Arora370
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2.1k
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How to check the read length for all the TCGA data samples in GDC?
tcga wes gdc gdc data written 11 months ago by Biologist70 • updated 11 months ago by Sean Davis21k
13
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4.2k
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Understanding contrasts limma
limma design and contrast matrix written 3.4 years ago by Andy9160 • updated 3.4 years ago by Aaron Lun23k
11
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744
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How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 2.7 years ago by yi.huang30 • updated 2.7 years ago by Gordon Smyth36k
3
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1
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1.7k
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Using DESeq2: experimental design and extracting results
deseq deseq2 written 4.8 years ago by bio200160 • updated 4.8 years ago by Michael Love22k
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