19
votes
3
answers
9.6k
views
23 follow
3
answers
New function lfcShrink() in DESeq2
deseq2 written 2.3 years ago by Michael Love25k • updated 10 days ago by Micheal Stark0
7
votes
1
answer
3.7k
views
14 follow
1
answer
14
votes
5
answers
3.7k
views
12 follow
5
answers
12
votes
2
answers
1.6k
views
9 follow
2
answers
differential expression analysis of htseq data with edgeR/voom
limma edger voom htseq rnaseq123 written 2.2 years ago by wd30 • updated 7 months ago by Gordon Smyth38k
3
votes
3
answers
391
views
9 follow
3
answers
2
votes
4
answers
11k
views
8 follow
4
answers
DEseq2 time-series design.
timecourse deseq2 design written 4.8 years ago by shao80 • updated 7 weeks ago by simon baldwin0
4
votes
0
answers
489
views
7 follow
0
answers
News: Bioconductor 3.8 is released
news bioconductor release written 9 months ago by Valerie Obenchain6.7k • updated 8 months ago by restat1100
9
votes
2
answers
763
views
7 follow
2
answers
Rsamtools v 1.99.6 installation error
rsamtools ubuntu biocmanager r 3.6 written 3 months ago by kubovcij0 • updated 3 months ago by Hervé Pagès ♦♦ 14k
5
votes
2
answers
387
views
7 follow
2
answers
13
votes
3
answers
1.2k
views
6 follow
3
answers
DESeq2 1.20.0 lfcshrink function
deseq2 differential expression logfoldchange lfcthreshold lfcshrink written 14 months ago by emi.sch10 • updated 6 weeks ago by yusuf.zhc0
0
votes
2
answers
1.6k
views
6 follow
2
answers
SNP6 data to VCF
snp oligo assign written 7.5 years ago by Sean Davis21k • updated 11 months ago by giulio.genovese0
12
votes
2
answers
2.0k
views
6 follow
2
answers
Plot ggplot2 and ggbio Images Together
ggbio ggplot2 cowplot written 4.2 years ago by andrew.j.skelton73320 • updated 26 days ago by Assa Yeroslaviz1.4k
7
votes
1
answer
229
views
6 follow
1
answer
2
votes
1
answer
98
views
6 follow
1
answer
How to get the final value of the after an automatic method in SAM
microarray sam written 12 weeks ago by xgt198662710 • updated 12 weeks ago by James W. MacDonald50k
5
votes
1
answer
150
views
6 follow
1
answer
correcting the batch effects in Limma and SVA
limma sva combat written 4 weeks ago by Bogdan570 • updated 4 weeks ago by Gordon Smyth38k
2
votes
2
answers
538
views
6 follow
2
answers
ChIPQC: error during annotation compilation
chipqc written 11 months ago by hdingwall10 • updated 11 months ago by Thomas Carroll400
1
vote
0
answers
206
views
5 follow
0
answers
How to monitor the performance of MS-based omics data?
normalization written 10 months ago by hemi.luan10 • updated 9 months ago by maxwelljohny1230
1
vote
2
answers
324
views
5 follow
2
answers
limma and intercept
limma intercept written 9 months ago by Nicolas Servant260
4
votes
1
answer
334
views
5 follow
1
answer
8
votes
2
answers
203
views
5 follow
2
answers
5
votes
1
answer
142
views
5 follow
1
answer
Principal components in DESeq2
deseq2 written 12 weeks ago by Mozart10
7
votes
3
answers
333
views
5 follow
3
answers
1
vote
3
answers
141
views
5 follow
3
answers
ATAC-QC shiftGAlignmentsList function
atac-seq atacseqqc written 5 weeks ago by Shuang He0 • updated 5 weeks ago by Julie Zhu4.0k
13
votes
1
answer
3.0k
views
5 follow
1
answer
Error: Bioconductor version '3.8' requires R version '3.5'
software error written 3 months ago by romanowska.j10 • updated 3 months ago by Mike Smith3.9k
0
votes
1
answer
426
views
5 follow
1
answer
nmf function not working
somaticsignatures nmf written 13 months ago by aslam.mohammed3980 • updated 9 months ago by Xin0
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