0
votes
1
answer
231
views
1
answer
plotMA in deseq2
deseq2 written 7 months ago by gv40 • updated 7 months ago by Michael Love23k
0
votes
1
answer
74
views
1
answer
Problem in installing
deseq2 software error written 8 weeks ago by jivarajivaraj10 • updated 8 weeks ago by Martin Morgan ♦♦ 23k
2
votes
2
answers
330
views
2
answers
1
vote
1
answer
157
views
1
answer
0
votes
1
answer
318
views
1
answer
3
votes
1
answer
94
views
1
answer
quant.sf files and tximport, transcripts not recognized
salmon tximport written 6 weeks ago by Merlin 10 • updated 6 weeks ago by Michael Love23k
1
vote
1
answer
217
views
1
answer
Problems with Organism.dplyr
organism.dplyr written 9 months ago by James W. MacDonald50k • updated 9 months ago by Martin Morgan ♦♦ 23k
3
votes
1
answer
156
views
1
answer
Error installing graphite
graphite written 6 months ago by Lluís Revilla Sancho470 • updated 6 months ago by gabriele.sales100
0
votes
1
answer
158
views
1
answer
DESeq2 design model that considers 3 factors
deseq2 multiple factor design written 8 months ago by sandra0 • updated 8 months ago by Michael Love23k
0
votes
1
answer
255
views
1
answer
weights must be finite positive value
edger estimatedispersions written 10 months ago by nonCodingGene10 • updated 10 months ago by Aaron Lun23k
0
votes
0
answers
96
views
0
answers
9
votes
1
answer
624
views
1
answer
0
votes
0
answers
137
views
0
answers
Query based on PMIDs
geoquery sradb written 5 months ago by Deepak Tanwar10
2
votes
1
answer
199
views
1
answer
edgeR. Known cancer genes are not differentially expressed?
edger tcga written 5 months ago by rina0 • updated 5 months ago by Aaron Lun23k
0
votes
0
answers
59
views
0
answers
0
votes
2
answers
116
views
2
answers
0
votes
1
answer
200
views
1
answer
comparing two GOstats result lists
gostats statistics written 11 months ago by sven.schenk10 • updated 11 months ago by James W. MacDonald50k
0
votes
0
answers
85
views
0
answers
Clustering large dataset
heatmap seqplots cairo graphics device failed to create cairo backend written 11 weeks ago by Marcelo Laia430 • updated 11 weeks ago by shepherl ♦♦ 1.4k
2
votes
2
answers
109
views
2
answers
How to get t-statistic values using edgeR?
edger R gsea fgsea t-statistic written 13 days ago by Biologist70 • updated 13 days ago by Gordon Smyth37k
0
votes
1
answer
125
views
1
answer
Interpretation of logFC and pvalues: LRT vs Wald tests in DESeq2
deseq2 written 4 months ago by RS10 • updated 4 months ago by Michael Love23k
0
votes
1
answer
107
views
1
answer
DESeq2 overestimates log2Fold Change
deseq2 written 3 months ago by marcomhefti0 • updated 3 months ago by James W. MacDonald50k
2
votes
1
answer
229
views
1
answer
2
votes
1
answer
136
views
1
answer
vennDiagram in Limma package
limma written 3 months ago by MicheK0 • updated 3 months ago by James W. MacDonald50k
3
votes
1
answer
296
views
1
answer
converting a fasta file to .2bit format
biostrings rtracklayer written 7 months ago by saripalligautam8610 • updated 7 months ago by Hervé Pagès ♦♦ 13k
0
votes
0
answers
188
views
0
answers
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