Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
about
faq
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
DEGs
•
reset
2
Votes
2
Replies
95
Views
Design formula for pairwise comparison of experimental setup with multiple factors
DEGs
DESeq2
12 days ago • updated 11 days ago
2021yearsold
• 0
0
Votes
1
Reply
59
Views
mircomb analysis from deg's list
mircomb
mrna
mirna
degs
interaction
6 months ago
andreia
• 0
0
Votes
2
Replies
77
Views
mirna-mrna interation mircomb (from DEGs and DEMs lists)
deseq2
mircomb
degs
dems
6 months ago
andreia
• 0
• updated 6 months ago
Michael Love
31k
0
Votes
1
Reply
65
Views
compareCluster error: On clusterProfiler DEGs enrichments analysis
clusterProfiler
Bioconductor
R
DEGs
7 months ago
tpm
• 0
3
Votes
2
Replies
66
Views
How to deal with elimination of genes when using filterByExpr function?
edger
DEGs
normalization
12 months ago
anikng
• 0
• updated 12 months ago
Gordon Smyth
41k
2
Votes
4
Replies
141
Views
How to make grouping and contrast for multfactor design?
edger
DEGs
12 months ago
anikng
• 0
2
Votes
3
Replies
174
Views
How to correctly set up the design in DESeq2 for RRPP?
deseq2
rrpp
DEGs
RNAseq
14 months ago
gmchaput
• 0
• updated 14 months ago
Michael Love
31k
0
Votes
2
Replies
1.1k
Views
Heatmap of selected genes
heatmap
DEGs
RNAseq
DESeq2
17 months ago
danikadigiacomo
• 0
• updated 17 months ago
mikhael.manurung
• 230
4
Votes
1
Reply
3.7k
Views
DESeq2: thousands of NA for pvalues?
deseq2
rna-seq
DEGs
cooks cutoff
2.0 years ago
aishu.jp
• 20
• updated 2.0 years ago
Michael Love
31k
4
Votes
3
Replies
297
Views
Differential profile for only one normal - tumor pair
edger
degs
paired design
2.5 years ago
takumima
• 10
• updated 2.5 years ago
Gordon Smyth
41k
3
Votes
5
Replies
790
Views
DEGs of microarray Data and hierarchical clustering and visualizing using heatmap
limma
heatmap
DEGs
3.0 years ago
lawarde.ankita1
• 20
• updated 3.0 years ago
Gordon Smyth
41k
3
Votes
1
Reply
656
Views
Common dispersion value using edgeR for DEGs analysis
edgeR
DEGS
common disperion
3.4 years ago
baus87
• 0
• updated 3.4 years ago
Aaron Lun
♦ 26k
6
Votes
4
Replies
1.2k
Views
Identification of DEGs through limma analysis
limma
microarray
DEGs
p values
lfc
3.6 years ago
rkp
• 0
13 results • Page
1 of 1
Recent ...
Replies
Comment: DESeq2 Error: ncol(countData) == nrow(colData) is not TRUE
by
Pedram
• 0
Hello Michael I could not make the same matrix although I did what you said
Comment: Replace a specific nucleotide sequence, at a specific position, with another in
by
Konstantinos Yeles
• 40
Hello @Benjamin-24571 for your example, I can suggest you this code: Read <- c("1","2","3","4") Sequences <- c("ACACCCACG", "AA…
Comment: CHIP Seq Analysis by DiffBind Package
by
shrinka.genetics
• 0
Hello Thanks for your reply. I changed my file format and now it ran. It gave one plot also. All file s are in same directory. No…
Answer: Installing Bioconductor packages in Docker
by
Konstantinos Yeles
• 40
Hello, @adklts-21974 My way to do the installation of packages in a docker is like this: FROM bioconductor/bioconductor_docker…
Comment: HTqPCR: dealing with technical replicates (filterCategory) and inability to anal
by
larissa.stanberry
• 0
I ran into the same issue. It appears that filtering does not carry over featureData with the exception of featureNames, e.g. call featureD…
Votes
A: single-cells RNA-seq analysis by MAST with unbalanced group size
single-cells RNA-seq analysis by MAST with unbalanced group size
A: single-cells RNA-seq analysis by MAST with unbalanced group size
A: DESeq2 1.20.0 lfcshrink function
DEXSeq Usage and Expression Confusion
Awards
• All
Prophet
to
ilysR
• 0
Popular Question
to
Sophie Marion de Proce
• 0
Prophet
to
jol.espinoz
• 30
Epic Question
to
jol.espinoz
• 30
Popular Question
to
jma1991
• 40
Locations
• All
The city by the bay,
6 minutes ago
Germany,
4 hours ago
Singapore,
5 hours ago
Australia,
6 hours ago
Republic of Ireland,
7 hours ago
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.3