Showing : biocgenerics • reset
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plotPCA with DESeq2 results in unable to find an inherited method for function plotPCA for signature matrix Error
deseq2 pheatmap RColorBrewer BiocGenerics
7 months ago matthewzli777 • 0 • updated 7 months ago Michael Love 31k
2
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2
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720
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IRanges which are not S4 generic: endoapply mendoapply error in loading oligoclasses
iranges oligoclasses BiocGenerics
2.6 years ago GENOMIC_region • 0
2
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1
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438
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Using 'BSgenome::export' to write each chromosome of an organism into separate files
bsgenome biocgenerics bsapply export
2.9 years ago ረ • 0 • updated 2.9 years ago James W. MacDonald 55k
1
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6
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Failure to update BiocGenerics in Ubuntu 17.10 from 0.22.1 to 0.23 and higher
BiocGenerics
3.0 years ago rea • 10
1
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4
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1.4k
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biocLite updating problem with Ubuntu 17.10
ubuntu biocgenerics s4vectors IRanges annotationdbi
3.1 years ago KRA • 0 • updated 3.1 years ago Martin Morgan 25k
0
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4
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Biocgenerics updating problem on ubuntu 17.10
bioconductor biocgenerics ubuntu package updates r update
3.2 years ago siinemselvi • 0
7
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4
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967
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BiocGenerics built with R 3.4.2 changes behaviour
biocgenerics iranges variantannotation
3.3 years ago ginggs • 40 • updated 3.3 years ago Hervé Pagès 14k
6
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6
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668
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Implementing fast mathematical and statistical operations on genomic variables in bioconductor
genomicranges biocgenerics rlelist genomicvars iranges
3.3 years ago Devin King • 20 • updated 3.3 years ago Hervé Pagès 14k
0
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1
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663
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BiocGenerics paste strange behavior (bug?)
biocgenerics
3.4 years ago Peter Langfelder ♦ 2.6k
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2
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889
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replacing previous import stats::mad by BiocGenerics::mad when loading IRanges
iranges biocgenerics dirichletmultinomial
4.2 years ago nick • 0 • updated 4.2 years ago Martin Morgan 25k
0
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3
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597
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Problem with function combine regarding merging two data frames based on their common rows
bioconductor merge data frames combine biocgenerics
5.2 years ago Konstantinos Yeles • 40
0
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4
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1.4k
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Access to BiocGenerics 0.11.4 package
BiocGenerics
6.4 years ago gregory voisin • 430 • updated 6.4 years ago James W. MacDonald 55k
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答复: 答复: 答复: problem with \"readCufflinks\"
cummeRbund BiocGenerics cummeRbund BiocGenerics
6.7 years ago Dan Tenenbaum ♦ 8.2k
0
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2.5k
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Problem installing BiocGenerics package
BiocGenerics BiocGenerics
7.0 years ago Guest User ♦ 12k • updated 7.0 years ago Dan Tenenbaum ♦ 8.2k
0
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2
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1.6k
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Trouble installing BiocGenerics
BiocGenerics BiocGenerics
7.0 years ago Andreas Leha • 30
0
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0
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1.0k
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BiocGenerics::plotMA (was: "egdeR troubles under new R 3.02")
BiocGenerics BiocGenerics
7.3 years ago Wolfgang Huber 13k
0
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2
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1.5k
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[R] Error in setMethod("combine"... was - Error when installing globaltest package
Infrastructure Cancer Biobase tkWidgets globaltest BiocInstaller BiocGenerics Cancer
7.8 years ago Shields, Rusty IMS • 40 • updated 7.8 years ago Martin Morgan 25k
0
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14
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1.5k
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BiocGenerics 0.5.6 not loading properly
Rsamtools BiocGenerics Rsamtools BiocGenerics
7.8 years ago TriS • 200 • updated 7.8 years ago Dan Tenenbaum ♦ 8.2k
0
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2
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1.0k
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GSEABase error parsing msigdb_v3.1.xml
GO Infrastructure hgu95av2 Biobase annotate graph Category AnnotationDbi BiocGenerics GO
8.0 years ago Lina Hultin-Rosenberg • 80 • updated 8.0 years ago Martin Morgan 25k
0
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8
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1.1k
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IRanges/List oddity: do.call of `c` on a list of IRangesList returns "list" only when the list is named
Cancer IRanges BiocGenerics Cancer IRanges BiocGenerics
8.1 years ago Hervé Pagès 14k • updated 8.1 years ago Michael Lawrence 11k
0
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1
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580
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Problem installing CummeRbund 2.0.0 (BiocGenerics)
BiocGenerics BiocGenerics
8.3 years ago Fluder, Eugene • 10 • updated 8.3 years ago Dan Tenenbaum ♦ 8.2k
21 results • Page 1 of 1
Recent ...
Replies
Comment: DESeq2 Error: ncol(countData) == nrow(colData) is not TRUE by Pedram • 0
Hello Michael I could not make the same matrix although I did what you said
Comment: Replace a specific nucleotide sequence, at a specific position, with another in by Konstantinos Yeles • 40
Hello @Benjamin-24571 for your example, I can suggest you this code: Read <- c("1","2","3","4") Sequences <- c("ACACCCACG", "AA…
Comment: CHIP Seq Analysis by DiffBind Package by shrinka.genetics • 0
Hello Thanks for your reply. I changed my file format and now it ran. It gave one plot also. All file s are in same directory. No…
Answer: Installing Bioconductor packages in Docker by Konstantinos Yeles • 40
Hello, @adklts-21974 My way to do the installation of packages in a docker is like this: FROM bioconductor/bioconductor_docker…
Comment: HTqPCR: dealing with technical replicates (filterCategory) and inability to anal by larissa.stanberry • 0
I ran into the same issue. It appears that filtering does not carry over featureData with the exception of featureNames, e.g. call featureD…
Votes
A: single-cells RNA-seq analysis by MAST with unbalanced group size
single-cells RNA-seq analysis by MAST with unbalanced group size
A: single-cells RNA-seq analysis by MAST with unbalanced group size
A: DESeq2 1.20.0 lfcshrink function
DEXSeq Usage and Expression Confusion
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