Showing : complexheatmap • reset
2
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4
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115
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Complexheatmap Installation Issue
ComplexHeatmap
13 days ago legro.melanie • 0
0
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0
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42
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How to show rownames in densityheatmaps
ComplexHeatmap
7 weeks ago Do it! • 0
0
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2
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97
Views
K Means Clustering Two Matrices for ComplexHeatmap
complexheatmap R
4 months ago pthom010 • 0
0
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2
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290
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ComplexHeatmap - how to change the position of the legend of rowAnnotation
ComplexHeatmap
7 months ago AR3513 • 0 • updated 7 months ago Zuguang Gu • 210
1
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6
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404
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Change fontsize/remove name of annotation ComplexHeatmap package
r rnaseq complexHeatmap annotation
7 months ago camillab. • 10 • updated 7 months ago Zuguang Gu • 210
0
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1
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95
Views
ComplexHeatmap's UpSet plots: how to convert a binary matrix into a list of sets
ComplexHeatmap UpSet
7 months ago moldach • 20
3
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2
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229
Views
Clustering differentially expressed genes in response to multiple treatments (using edgeR)
edger complexheatmap R clustering
8 months ago eggrandio • 0 • updated 8 months ago Gordon Smyth 41k
0
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6
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718
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Error: node stack overflow when trying to plot large dataset using Complexheatmap
Complexheatmap
16 months ago AB • 100 • updated 16 months ago Zuguang Gu • 210
3
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7
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421
Views
Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix heatmap ComplexHeatmap missing values R
16 months ago mohammedtoufiq91 • 0 • updated 16 months ago Zuguang Gu • 210
3
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2
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1.6k
Views
ComplexHeatmap removes row labels if annotation is added
annotation show_row_names complexheatmap
18 months ago alexw858 • 0
0
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1
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165
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ComplexHeatmap : can't find the arguments inherited from the previous version
ComplexHeatmap
20 months ago shbrief • 10 • updated 20 months ago Zuguang Gu • 210
4
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3
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576
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Align legends to each heatmap in a ComplexHeatmap with 2 heatmaps
complexheatmap r
20 months ago Ram • 60 • updated 20 months ago Zuguang Gu • 210
0
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1
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183
Views
ComplexHeatmap package will not display heatmaps
ComplexHeatmap software error
21 months ago jmKeith • 0 • updated 21 months ago James W. MacDonald 56k
2
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1
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881
Views
Make UpSet function display numbers above the bars
ComplexHeatmap
23 months ago Vinicius Henrique da Silva • 40 • updated 23 months ago Zuguang Gu • 210
0
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1
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505
Views
Error with ComplexHeatmap. Showing only part of image.
Complexheatmap
23 months ago Goku • 0
0
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2
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571
Views
ComplexHeatmap column dendrogram
complexheatmap
2.9 years ago James W. MacDonald 56k • updated 2.9 years ago jokergoo • 130
4
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12
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1.7k
Views
Combining ComplexHeatmap with other plot types
complexheatmap ggplot2
3.2 years ago my4 • 0 • updated 3.2 years ago Zuguang Gu • 210
1
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5
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3.5k
Views
How to add both row and column labels to Complexheatmap
complexheatmap labels
3.3 years ago dilawerkh4 • 0
0
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0
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612
Views
Problem with heatmap by ComplexHeatmap
complexheatmap Rstudio NOISeq
3.4 years ago Luiz • 0
0
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1
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456
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about using the names of the rows and columns in ComplexHeatmap
complexheatmap
3.4 years ago Bogdan • 610
3
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2
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1.4k
Views
Automatic color assignment for annotations on ComplexHeatmap
complexheatmap
3.4 years ago CodeAway • 60
0
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0
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551
Views
Changing row height in ComplexHeatmap
complexheatmap
3.4 years ago johnnytam100 • 0 • updated 3.4 years ago Gordon Smyth 41k
2
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3
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850
Views
about MAFTOOLS and ComplexHeatmap
complexheatmap maftools
3.4 years ago Bogdan • 610 • updated 3.4 years ago anand_mt • 80
0
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2
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952
Views
Extracting subclusters from original data
complexheatmap metabolomics
3.5 years ago Mina • 0 • updated 3.5 years ago sina.nassiri • 90
0
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2
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674
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legend with gradient in ComplexHeatmap
complexheatmap
3.5 years ago AR3513 • 0
2
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2
Replies
559
Views
about reshaping a data frame
maftools complexheatmap
3.6 years ago Bogdan • 610 • updated 3.6 years ago Haiying.Kong • 110
0
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1
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507
Views
Oncoprint function in ComplexHeatmap
complexheatmap
3.7 years ago Bogdan • 610
0
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5
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687
Views
Problem trying to decorate a heatmap inside a function
complexheatmap
3.7 years ago AR3513 • 0
0
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1
Reply
483
Views
Error in Heatmap...
complexheatmap
3.9 years ago baranikumar22 • 0
8
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1
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5.4k
Views
extracting the genes associated with the clusters
heatmap.2 pheatmap complexheatmap heatplus
3.9 years ago Bogdan • 610 • updated 3.9 years ago Gavin Kelly • 570
0
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1
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532
Views
Drawing a HeatMapList while retaining the original row order of each heat map
complexheatmap
3.9 years ago d r • 150 • updated 3.9 years ago Steve Lianoglou 13k
1
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2
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711
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Error when using multiple heatmaps in ComplexHeatmaps
ComplexHeatmap bug
4.0 years ago brt381 • 0
2
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1
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1.4k
Views
Assign custom dendrogram to ComplexHeatmap Heatmap object
complexheatmap heatmap.2 dendrogram dendextend heatmap
4.2 years ago enricoferrero • 570 • updated 4.2 years ago jokergoo • 130
0
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1
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647
Views
How to manage multiple legends in heatmap_legend_param (ComplexHeatmap) ?
ComplexHeatmap complexheatmap
4.3 years ago g.atla • 10
3
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2
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9.4k
Views
Plotting several heatmaps onto the same grid with the ComplexHeatmap package in R
complexheatmap
4.3 years ago chriad • 10 • updated 4.3 years ago jokergoo • 130
0
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1
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545
Views
ComplexHeatmap Legend labels
complexheatmap
4.4 years ago vedran.franke • 0
3
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4
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2.4k
Views
ComplexHeatmap - Annotation without a named vector
complexheatmap
4.5 years ago andrew.j.skelton73 • 340 • updated 4.4 years ago jokergoo • 130
3
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2
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1.6k
Views
ComplexHeatmap - Heatmap function within a for loop
ComplexHeatmap for loop Heatmap function
4.5 years ago An De Bondt • 40 • updated 4.5 years ago James W. MacDonald 56k
0
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1
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458
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How to decorate complexheatmap?
complexheatmap
4.5 years ago Hem • 0
2
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2
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3.2k
Views
Complex Heatmap - hide one legend, show 2 - out off three annotations
complexheatmap bioconductor annotation heatmap legend
4.7 years ago • updated 4.6 years ago annkatrin.goepfert • 10
0
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1
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994
Views
Complexheatmap question on sorting columns
complexheatmap
4.8 years ago tmcelrath • 0
1
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4
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2.4k
Views
complexHeatmap - distance calculation
complexheatmap
5.0 years ago annkatrin.goepfert • 10
0
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1
Reply
689
Views
Annotated heatmap limits
complexheatmap
5.2 years ago michael.ridley6 • 0 • updated 5.2 years ago Steve Lianoglou 13k
4
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4
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5.2k
Views
ComplexHeatmap Scale by Row
ComplexHeatmap heatmap
5.6 years ago andrew.j.skelton73 • 340 • updated 5.6 years ago James W. MacDonald 56k
44 results • Page 1 of 1
Recent ...
Replies
Comment: DESeq2 and shrinkage of log2 fold changes by Michael Love 31k
What do you mean that the set with FDR bound increases? Shrinkage methods in current versions of DESeq2 do not change the FDR (`padj` colum…
Answer: The compare result is different in score and Conc in DiffBind by shangguandong1996 • 20
I know in newer DiffBind version, the default of `score` argument is different, So I post a newer DiffBind version result. ``` library(…
Answer: Conc_1 in differnet dba.report result is slightly different by shangguandong1996 • 20
For a newer DiffBind version ``` library(DiffBind) library(BiocParallel) library(dplyr) tamoxifen <- dba(sampleSheet="tamoxifen.csv") ta…
Comment: Conc_1 in differnet dba.report result is slightly different by shangguandong1996 • 20
Hi, Dr Stark I just find you fixed the link, and I want to use the test data to reproduce my issue ``` library(DiffBind) library(BiocPara…
Comment: DESeq2 and shrinkage of log2 fold changes by Asier • 0
One question related to this. In the case of using the schrinkage (in my dataset of miRNA-seq) the number of SDE miRNAs (FDR) increases wit…
Votes
A: Performing differential gene analysis on RT PCR experimental data
A: Performing differential gene analysis on RT PCR experimental data
Comment: DESeq2: Significant padj and LFC in a 0 vs. 20 counts comparison?
A: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
Comment: DESeq2: Significant padj and LFC in a 0 vs. 20 counts comparison?
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