Showing : error • reset
2
Votes
3
Replies
104
Views
R Error: package ‘GenomeInfoDb’ could not be loaded on MacBook
error mac DESeq2 GenomeInfoDb R
13 days ago Dan • 10 • updated 4 days ago Martin Morgan 25k
1
Vote
1
Reply
82
Views
Errors in installing RforProteomics package
error RforProteomics Install
7 weeks ago Phoebe • 0 • updated 7 weeks ago Mike Smith ♦ 4.8k
0
Votes
1
Reply
67
Views
testClusters and trimClusters error in BiSeq
BiSeq testClusters error dmr
6 months ago akhaira • 0
6
Votes
6
Replies
188
Views
Suggestion for next revision of edgeR User Guide re Design matrix setup
edger error
7 months ago pdunn • 0 • updated 7 months ago Gordon Smyth 41k
0
Votes
14
Replies
116
Views
annFUN error TOPGO
TOPGO annFUN error
9 months ago eleonora.porcu • 0 • updated 9 months ago Kevin Blighe 2.3k
0
Votes
0
Replies
34
Views
Error on FindOptimalBinning function
bhc error
10 months ago pavel.granalacant • 0
0
Votes
0
Replies
37
Views
Multicollinearity and pR2Y =0.1
opls-da error multicollinearity
11 months ago adriana.roca-fernandez • 0
0
Votes
1
Reply
197
Views
boxplot Error in Bioconductor
boxplot bioconductor R error
13 months ago l154359 • 0
0
Votes
4
Replies
135
Views
nucleR ERROR unable to find an inherited method for function peakDetection for signature
nucleosome peaks error Job
13 months ago anne.kannengiesser • 0 • updated 13 months ago James W. MacDonald 55k
0
Votes
5
Replies
169
Views
readTranscriptFeatures from genomation
R Rstudio Error readTranscriptFeatures genomation
14 months ago hwaterma • 0 • updated 14 months ago altuna akalin • 20
0
Votes
3
Replies
131
Views
Error in E-Eb Limma package
limma error E-Eb
15 months ago diego.orihuelatacuri • 0 • updated 15 months ago Gordon Smyth 41k
4
Votes
7
Replies
187
Views
bam files to hilbert curve
HilbertCurve error bamfiles GRobject
16 months ago adklts • 0
0
Votes
6
Replies
2.5k
Views
Rhtslib - install error
Rhtslib installation error zlib
2.2 years ago boboshaq • 0 • updated 16 months ago leoadam014 • 0
0
Votes
1
Reply
244
Views
DiffBind dba error
DiffBind dba R error
19 months ago annika-helverson • 0 • updated 17 months ago Rory Stark ♦ 3.5k
0
Votes
1
Reply
292
Views
Help with installation of readat package
readat error
17 months ago tbryson1 • 0 • updated 17 months ago shepherl 2.5k
2
Votes
2
Replies
352
Views
TCGAbiolinks GDCprepare error
TCGAbiolinks GDCprepare error
18 months ago Talip Zengin • 10 • updated 18 months ago tiagochst • 150
0
Votes
1
Reply
306
Views
R: oligo packages install error
oligo packages error
18 months ago get3232 • 0 • updated 18 months ago Martin Morgan 25k
0
Votes
0
Replies
186
Views
Error in parseGenBank
genbankr parseGenBank gbk error
18 months ago ashley.dederich • 0
2
Votes
3
Replies
265
Views
How can I overcome the error of "No residual degrees of freedom in linear model fits"?
limma microarray error
18 months ago Jurat Shahidin • 70 • updated 18 months ago Dario Strbenac ♦ 1.5k
0
Votes
6
Replies
530
Views
Error in getOneSeqFromBSgenomeMultipleSequences During singeR tutorial
error
19 months ago dfcarril • 0
0
Votes
4
Replies
462
Views
DESeq2 compare all_vs_all levels error
deseq2 error RNAseq
19 months ago aishu.jp • 20 • updated 19 months ago swbarnes2 • 620
0
Votes
3
Replies
145
Views
Error in if (all(x <= minReadCount) & lambda <= minReadCount) { : missing value where TRUE/FALSE needed
cnmops cn.mops error
19 months ago s1812756 • 0 • updated 19 months ago Martin Morgan 25k
0
Votes
6
Replies
560
Views
atacseqQC error while splittin the bamfile
ATACseqQC ATAC-seq error split bam file
20 months ago theodore.georgomanolis • 0 • updated 20 months ago contact • 0
0
Votes
8
Replies
366
Views
tximport command error
tx2gene txi error
20 months ago eliztran • 0 • updated 20 months ago James W. MacDonald 55k
2
Votes
6
Replies
274
Views
EdgeR glmTreat error
edger error
21 months ago lucap • 0 • updated 21 months ago James W. MacDonald 55k
1
Vote
1
Reply
444
Views
The query to the BioMart webservice returned an invalid result: biomaRt expected a character string of length 1
biomaRt error
21 months ago steppydeklin • 10 • updated 21 months ago James W. MacDonald 55k
0
Votes
1
Reply
183
Views
Error in intramodularConnectivity(ADJ1, colorh1) : object 'colorh1' not found
error wgcna affymetrix data
21 months ago pratikshasharma47 • 0 • updated 21 months ago Peter Langfelder ♦ 2.6k
2
Votes
6
Replies
360
Views
featurecounts Rsubread ERROR on exon_id
R error software error Rsubread featurecounts
21 months ago edejong • 0 • updated 21 months ago Wei Shi ♦ 3.3k
2
Votes
3
Replies
1.6k
Views
DESeq2- preliminary study no replicates
deseq2 replicates error DESeqDataSetFromMatrix
21 months ago Yonatan Amzaleg • 0 • updated 21 months ago Michael Love 31k
1
Vote
1
Reply
199
Views
Error in getBM(c("affy_rice", "ensembl_gene_id", "entrezgene", "external_gene_name"), : could not find function "featureNames"
annotation error biomaRT affy ricedataset
22 months ago pratikshasharma47 • 0 • updated 22 months ago Mike Smith ♦ 4.8k
1
Vote
2
Replies
416
Views
Errors installing mzR package
proteomics error
22 months ago pdaltron • 0 • updated 22 months ago Laurent Gatto 1.4k
2
Votes
5
Replies
764
Views
GDCdownload does not work
GDCdow tcgabiolinks error tcgadownload download_error
2.1 years ago miki716 • 0 • updated 2.1 years ago Tiago Chedraoui Silva • 260
0
Votes
1
Reply
254
Views
Linking PhosMap to issue number: 953
error github package contribution
2.1 years ago ecnuzdd • 0 • updated 2.1 years ago Martin Morgan 25k
0
Votes
2
Replies
346
Views
Biostrings: revComp error: Not compatible with STRSXP
biostrings Error Not compatible with STRSXP
2.1 years ago camille.4nier • 0
0
Votes
1
Reply
461
Views
Conda Env & biocLite("affyio") : < undefined symbol: gzclose >
Conda affyio error
2.2 years ago benjamin.saintpierre • 0
0
Votes
6
Replies
399
Views
DEsubs - Error in read.table during DEsubs command
DEsubs error
2.4 years ago Talip Zengin • 10 • updated 2.4 years ago Panos Balomenos • 0
0
Votes
2
Replies
435
Views
Error in saving diffmeth data
error
2.5 years ago kjfilipski • 0
1
Vote
5
Replies
492
Views
How do I stop DESeq2 from loading and additional errors related to the package.
r deseq2 error
2.5 years ago mdi3 • 0 • updated 2.5 years ago Axel Klenk • 940
0
Votes
0
Replies
256
Views
Error while extracting pseudo amino acid composition using protr
r source code error
2.6 years ago shreyasarkar0 • 0
5
Votes
7
Replies
1.7k
Views
Gage package; go.gset() function error: argument "go_id" is missing
gage package error
2.7 years ago Miskey, Csaba • 20 • updated 2.7 years ago James W. MacDonald 55k
0
Votes
1
Reply
414
Views
Error: 'unknown input format' while trying http://bioconductor.org/packages/3.7/bioc
error oligo affy
2.7 years ago kritikamish99 • 10
0
Votes
1
Reply
497
Views
[metagenomeSeq] "Error: Warning sample with one or zero features" from cumNormStatFast
metagenomeseq cumNormStatFast features error
2.7 years ago jol.espinoz • 30
1
Vote
1
Reply
338
Views
Installing DESeq2 error: missing value where TRUE/FALSE needed
deseq2 error biocinstaller
2.7 years ago dfhannum • 10 • updated 2.7 years ago Martin Morgan 25k
3
Votes
2
Replies
849
Views
Unable to install a Bioconductor package to local directory
error biocinstaller
2.7 years ago tagirdzh • 0 • updated 2.7 years ago James W. MacDonald 55k
0
Votes
3
Replies
1.1k
Views
Error when constructing DESeqDataSetFromMatrix (Error in round(assay(se)): non-numeric argument to mathematical function)
deseq2 R error
2.8 years ago jamesvsheppard • 0 • updated 2.8 years ago Michael Love 31k
0
Votes
3
Replies
855
Views
incorrect biomaRt output order of gene list
biomart ensembldb error
2.9 years ago Yuqia • 0
2
Votes
4
Replies
3.9k
Views
converting ensembl transcript ID to ensemble gene: problem & missing values
biomart error ensembldb
2.9 years ago Yuqia • 0
0
Votes
0
Replies
327
Views
qaProcess.timeline() - error - Unable to find file
error
2.9 years ago lloyd.izard • 80
0
Votes
0
Replies
435
Views
ABarray process error for ABI Human Genome Survey V2 data set
Abarray error ABI Human Genome Survey V2
2.9 years ago judemtaylor • 0
3
Votes
11
Replies
1.5k
Views
GEOquery http:// url error
geoquery error getgeo microarray geo
3.8 years ago jblack29 • 0 • updated 3.0 years ago Sean Davis 21k
140 results • Page 1 of 3
Recent ...
Replies
Comment: DESeq2 Error: ncol(countData) == nrow(colData) is not TRUE by Pedram • 0
Hello Michael I could not make the same matrix although I did what you said
Comment: Replace a specific nucleotide sequence, at a specific position, with another in by Konstantinos Yeles • 40
Hello @Benjamin-24571 for your example, I can suggest you this code: Read <- c("1","2","3","4") Sequences <- c("ACACCCACG", "AA…
Comment: CHIP Seq Analysis by DiffBind Package by shrinka.genetics • 0
Hello Thanks for your reply. I changed my file format and now it ran. It gave one plot also. All file s are in same directory. No…
Answer: Installing Bioconductor packages in Docker by Konstantinos Yeles • 40
Hello, @adklts-21974 My way to do the installation of packages in a docker is like this: FROM bioconductor/bioconductor_docker…
Comment: HTqPCR: dealing with technical replicates (filterCategory) and inability to anal by larissa.stanberry • 0
I ran into the same issue. It appears that filtering does not carry over featureData with the exception of featureNames, e.g. call featureD…
Votes
A: single-cells RNA-seq analysis by MAST with unbalanced group size
single-cells RNA-seq analysis by MAST with unbalanced group size
A: single-cells RNA-seq analysis by MAST with unbalanced group size
A: DESeq2 1.20.0 lfcshrink function
DEXSeq Usage and Expression Confusion
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