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noiseq
•
reset
0
Votes
2
Replies
96
Views
Differential expression on RNAseq without replicates
DESeq2
NOISeq
edgeR
27 days ago
Themis
• 0
• updated 26 days ago
ATpoint
• 390
0
Votes
2
Replies
135
Views
deseq2 + filtering low counts with noiseq function
deseq2
noiseq
lowcounts
rnaseq
4 months ago
andreia
• 0
• updated 4 months ago
Michael Love
31k
0
Votes
0
Replies
118
Views
How to arrange multiple plots into one page in NOISeq?
noiseq
RNA-seq
quality control
17 months ago
ag1805x
• 50
0
Votes
0
Replies
148
Views
NOISeq 'readData' not writing correctly
software error
NOISeq
18 months ago
jledmondson
• 0
0
Votes
1
Reply
157
Views
Is possible to use NOISeq with counts from RSubread?
noiseq
rsubread
tophat
bowtie
bowtie2
19 months ago
Marcelo Laia
• 440
0
Votes
0
Replies
281
Views
Noiseqbio function (NOISEQ package)
noiseq
logfoldchange
2.8 years ago
Aurora
• 10
0
Votes
0
Replies
319
Views
NOISeq: Need help with my data frame
R
noiseq
data.frame
3.0 years ago
aokoro
• 0
0
Votes
0
Replies
611
Views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
3.3 years ago
Luiz
• 0
0
Votes
3
Replies
600
Views
Is the CPM filtering method from NOISeq unsupervised?
rnaseq
de analysis
gene filtering
noiseq
3.4 years ago
Mau
• 20
• updated 3.4 years ago
James W. MacDonald
55k
0
Votes
5
Replies
2.1k
Views
GC content and length bias correction with DESeq2 using cqn normalization factor matrix
deseq2
cqn
noiseq
3.7 years ago
glmazzo
• 0
• updated 3.7 years ago
Michael Love
31k
0
Votes
0
Replies
827
Views
NOISeq error message while using ARSyNseq batch correction function
noiseq
batch effect
ARSyNseq
5.2 years ago
lina.faller
• 0
0
Votes
0
Replies
579
Views
Question: type of NOISeq package input file
RNASeq
NOISeq
RNASeq
NOISeq
7.9 years ago
Guest User
♦ 12k
0
Votes
2
Replies
1.9k
Views
NOISeq initialization problem
NOISeq
NOISeq
8.3 years ago
Guest User
♦ 12k
• updated 8.3 years ago
Dan Tenenbaum
♦ 8.2k
0
Votes
4
Replies
1.1k
Views
NOISeq installation error
NOISeq
NOISeq
8.3 years ago
Fatemehsadat Seyednasrollah
• 260
• updated 8.3 years ago
Sean Davis
21k
0
Votes
0
Replies
708
Views
NOISeq-real input parameters
NOISeq
NOISeq
8.8 years ago
Guest User
♦ 12k
15 results • Page
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Recent ...
Replies
Comment: DESeq2 Error: ncol(countData) == nrow(colData) is not TRUE
by
Pedram
• 0
Hello Michael I could not make the same matrix although I did what you said
Comment: Replace a specific nucleotide sequence, at a specific position, with another in
by
Konstantinos Yeles
• 40
Hello @Benjamin-24571 for your example, I can suggest you this code: Read <- c("1","2","3","4") Sequences <- c("ACACCCACG", "AA…
Comment: CHIP Seq Analysis by DiffBind Package
by
shrinka.genetics
• 0
Hello Thanks for your reply. I changed my file format and now it ran. It gave one plot also. All file s are in same directory. No…
Answer: Installing Bioconductor packages in Docker
by
Konstantinos Yeles
• 40
Hello, @adklts-21974 My way to do the installation of packages in a docker is like this: FROM bioconductor/bioconductor_docker…
Comment: HTqPCR: dealing with technical replicates (filterCategory) and inability to anal
by
larissa.stanberry
• 0
I ran into the same issue. It appears that filtering does not carry over featureData with the exception of featureNames, e.g. call featureD…
Votes
A: single-cells RNA-seq analysis by MAST with unbalanced group size
single-cells RNA-seq analysis by MAST with unbalanced group size
A: single-cells RNA-seq analysis by MAST with unbalanced group size
A: DESeq2 1.20.0 lfcshrink function
DEXSeq Usage and Expression Confusion
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