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omiccircos
•
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0
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233
Views
Question about OmicCircos
OmicCircos
2.7 years ago
ch8316f5eyu
• 0
0
Votes
0
Replies
365
Views
Synteny plots with OmicCircos or Rcircos
omiccircos
rcircos
3.3 years ago
mictadlo
• 0
0
Votes
0
Replies
395
Views
Omiccircos: how to draw a circos plot for non-model organisms
omiccircos
seganglepo
sim.circos
circos
3.4 years ago
Didi
• 10
2
Votes
3
Replies
2.4k
Views
Making a circos plot to show expression for a gene set rather than whole genome
Gene set
gene set analysis
omiccircos
6.0 years ago
Peter.Wood
• 0
• updated 3.4 years ago
yifangt
• 20
0
Votes
0
Replies
554
Views
OmicCircos: included UCSC.hg19.chr dataframe is actually hg18 cytobands
omiccircos
bug
hg19
hg18
data
3.7 years ago
matthew.bashton
• 0
0
Votes
1
Reply
843
Views
Circos Tile colors
OmicCircos
RCircos
3.7 years ago
Radek
• 70
• updated 3.7 years ago
bernatgel
• 130
0
Votes
1
Reply
1.1k
Views
OmicCircos - Error in 1:scale.n : NA/NaN argument
OmicCircos
3.8 years ago
Stefan Langenberg
• 0
0
Votes
0
Replies
687
Views
OmicCircos Error in Colnames attribute mus be the same length as the vector
r
omiccircos
4.0 years ago
theobroma22
• 10
0
Votes
0
Replies
663
Views
OmicCircos barplot height and scale
omiccircos
4.0 years ago
Miss Agnieszka Aleksandra Golicz
• 40
0
Votes
0
Replies
366
Views
OmicCircos for non human genomes
omiccircos
rnaseq
plants
4.0 years ago
Didi
• 10
0
Votes
0
Replies
404
Views
Zoom function in OmicCircos
OmicCircos
Zoom
4.0 years ago
abmora
• 0
0
Votes
0
Replies
369
Views
How to plot a single segment using OmicCircos?
omiccircos
4.4 years ago
Shambho
• 0
0
Votes
0
Replies
387
Views
the 23re and 24th segs cannot be plotted
OmicCircos
4.6 years ago
magcj89
• 0
3
Votes
2
Replies
1.4k
Views
How to represent a relationship between physical map and linkage map of a sequenced data using OmicCircos or another similar
omiccircos
software R
bioconductor for genomic data science
linkage disequilibrium
4.8 years ago
pertille
• 0
• updated 4.8 years ago
Hu, Ying NIH/NCI [E]
• 50
0
Votes
0
Replies
797
Views
Can OmicCircos handle chicken ChIA-PET interactome?
OmicCircos
chicken
5.0 years ago
Gary
• 20
0
Votes
0
Replies
820
Views
Circos Styling plots is now easy with canceR package
canceR
visualization
omiccircos
5.7 years ago
kmezhoud
• 10
0
Votes
0
Replies
843
Views
News:
OmicCircos was updated
visualization
omiccircos
News
5.8 years ago
Hu, Ying NIH/NCI [E]
• 50
1
Vote
3
Replies
895
Views
OmicCircos mapping data file.
omiccircos
6.2 years ago
abdul rawoof
• 60
• updated 5.8 years ago
Hu, Ying NIH/NCI [E]
• 50
0
Votes
1
Reply
1.2k
Views
extdata missing for non-human OmicCircos plots?
OmicCircos
6.2 years ago
micahgearhart
• 0
• updated 5.8 years ago
Hu, Ying NIH/NCI [E]
• 50
0
Votes
2
Replies
1.1k
Views
How to specifiy colors for polygon links when using circos function of OmicCircos package
graph
omiccircos
5.9 years ago
wei.shen
• 0
• updated 5.9 years ago
Hu, Ying NIH/NCI [E]
• 50
0
Votes
1
Reply
832
Views
Larger values masking others for OmicCircos heatmap
differential gene expression
heatmap
Circos
omiccircos
6.0 years ago
Peter.Wood
• 0
21 results • Page
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Answer: Limma help (creating design matrix)
by
James W. MacDonald
55k
There's no need to do the second line in your example. The limma package is quite happy to accept an `ExpressionSet` as input, so you don't…
Answer: Rhdf5lib installation problem
by
Mike Smith
♦ 4.8k
Thanks for the details. The error occurs at the following step: ``` ../libtool: line 7486: cd: -/: invalid option ``` and I think …
Comment: Normalization for two bulk RNA datasets with different library sizes
by
Michael Love
31k
Given that tissues are nested within dataset, and you are interested in looking at time differences within tissue, I'd recommend processing…
Comment: Normalization for two bulk RNA datasets with different library sizes
by
K.
• 0
I would like to retrieve a list of target genes in all tissues after certain pathway activation to evaluate to what extent are the target g…
Answer: Normalization for two bulk RNA datasets with different library sizes
by
Michael Love
31k
What is the comparison of interest?
Votes
Answer: Limma help (creating design matrix)
Comment: Normalization for two bulk RNA datasets with different library sizes
How to better design a Volcano plot
Replace a specific nucleotide sequence, at a specific position, with another in Biostrings
Comment: How to better design a Volcano plot
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EMBL European Molecular Biology Laboratory,
17 minutes ago
The city by the bay,
1 hour ago
WEHI, Melbourne, Australia,
4 hours ago
Argentina, Rosario (Universidad Nacional de Rosario),
6 hours ago
EMBL Heidelberg / de.NBI,
7 hours ago
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