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pcamethods
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27
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pcaMethods percent missing interpretation
pcaMethods
1 day ago
k.vitting.seerup
• 100
0
Votes
1
Reply
203
Views
Getting loadings of components from pcaMethods
pcamethods
2.2 years ago
johnnytam100
• 0
• updated 2.2 years ago
James W. MacDonald
56k
0
Votes
0
Replies
389
Views
imputing data using pcaMethods with large amounts of missing data in rows
pcamethods
missing data
3.8 years ago
eli-sava
• 0
0
Votes
4
Replies
544
Views
Error from pcaMethods and psych packages from biocLite("pcaMethods")
pcamethods
3.8 years ago
allantanaka11
• 0
• updated 3.8 years ago
James W. MacDonald
56k
2
Votes
1
Reply
612
Views
R package "metaboliteData" for package "pcaMethods"
metaboliteData
pcaMethods
pcamethods
r package
metabolite Data
4.1 years ago
lukasz.galecki
• 10
• updated 4.1 years ago
Valerie Obenchain
♦ 6.7k
1
Vote
3
Replies
1.1k
Views
PCA clusters by replicates not by study groups
pcamethods
r
4.8 years ago
stolarek.ir
• 0
0
Votes
3
Replies
606
Views
Problems with robustPca in pcaMethods
pcaMethods
pcaMethods
6.9 years ago
Julian Gehring
♦ 1.3k
0
Votes
0
Replies
594
Views
Problems with robustPca in pcaMethods
pcaMethods
pcaMethods
6.9 years ago
Guest User
♦ 12k
0
Votes
0
Replies
564
Views
Troubles installing pcaMethods on R2.12.1
pcaMethods
pcaMethods
9.8 years ago
Alfons Gonzalez
• 10
0
Votes
0
Replies
612
Views
Troubles installing pcaMethods on R2.12.1
pcaMethods
pcaMethods
10.0 years ago
Manca Marco PATH
• 340
0
Votes
0
Replies
399
Views
Bioconductor Digest, Vol 87, Issue 17
Clustering
pcaMethods
Clustering
pcaMethods
10.7 years ago
avinash gupta
• 130
0
Votes
2
Replies
958
Views
screeplot in package pcaMethods fails
pcaMethods
pcaMethods
12.1 years ago
Yury Bukhman
• 20
• updated 12.1 years ago
Wolfgang Huber
13k
0
Votes
2
Replies
651
Views
package R.oo (or R.00?), within package R.classes, and function robustPca
aroma.light
pcaMethods
aroma.light
pcaMethods
12.3 years ago
Tillinghast, Guy, M.D.
• 30
• updated 12.3 years ago
Sean Davis
21k
0
Votes
0
Replies
967
Views
when to impute the missing value?
impute
pcaMethods
impute
pcaMethods
13.2 years ago
De-Jian ZHAO
• 240
14 results • Page
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Recent ...
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Answer: The compare result is different in score and Conc in DiffBind
by
shangguandong1996
• 20
I know in newer DiffBind version, the default of `score` argument is different, So I post a newer DiffBind version result. ``` library(…
Answer: Conc_1 in differnet dba.report result is slightly different
by
shangguandong1996
• 20
For a newer DiffBind version ``` library(DiffBind) library(BiocParallel) library(dplyr) tamoxifen <- dba(sampleSheet="tamoxifen.csv") ta…
Comment: Conc_1 in differnet dba.report result is slightly different
by
shangguandong1996
• 20
Hi, Dr Stark I just find you fixed the link, and I want to use the test data to reproduce my issue ``` library(DiffBind) library(BiocPara…
Comment: DESeq2 and shrinkage of log2 fold changes
by
Asier
• 0
One question related to this. In the case of using the schrinkage (in my dataset of miRNA-seq) the number of SDE miRNAs (FDR) increases wit…
Comment: [Limma] Correcting Dye swap effect
by
MatthewP
• 0
Hello, Can you explain "M vs M plot" with more details? I have include dye-effect in limma design model, and got very few probes differenti…
Votes
A: Performing differential gene analysis on RT PCR experimental data
A: Performing differential gene analysis on RT PCR experimental data
Comment: DESeq2: Significant padj and LFC in a 0 vs. 20 counts comparison?
A: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
Comment: DESeq2: Significant padj and LFC in a 0 vs. 20 counts comparison?
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