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quantsmooth
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823
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quantsmooth chromosome sizes problem (genome release specification possible ?)
quantsmooth
6.3 years ago
bob.stephens.2005
• 0
• updated 6.3 years ago
Jan Oosting
• 20
0
Votes
0
Replies
588
Views
Mapping deletions onto chromosome ideograms
quantsmooth
quantsmooth
9.3 years ago
Srinivas Srikanth
• 70
0
Votes
0
Replies
599
Views
plotting chromosome band names in GenomeGraphs
ideogram
quantsmooth
GenomeGraphs
ideogram
quantsmooth
GenomeGraphs
9.5 years ago
Pete Shepard
• 240
0
Votes
2
Replies
805
Views
karyotype annotation
Clustering
annotate
quantsmooth
Clustering
annotate
quantsmooth
9.7 years ago
Nandini B
• 30
• updated 9.7 years ago
Oosting, J. PATH
• 550
0
Votes
1
Reply
745
Views
Problem reading data with beadarray package
geneplotter
affy
affyio
beadarray
quantsmooth
beadarraySNP
geneplotter
affy
affyio
13.2 years ago
Elizabeth McClellan
• 10
• updated 13.2 years ago
Matt Ritchie
• 460
0
Votes
0
Replies
534
Views
Pulling significant gene ids from beadarray data
Biobase
annotate
affy
affyio
beadarray
quantsmooth
beadarraySNP
lumi
Biobase
annotate
13.4 years ago
Johnstone, Alice
• 410
0
Votes
1
Reply
652
Views
beadarray - combing
geneplotter
affy
affyio
beadarray
quantsmooth
beadarraySNP
geneplotter
affy
affyio
13.4 years ago
Krys Kelly
• 270
• updated 13.4 years ago
Mark Dunning
• 320
0
Votes
1
Reply
665
Views
ControlID Qcinfo slot in Illumina beadarray summary data?
geneplotter
affy
affyio
beadarray
quantsmooth
beadarraySNP
geneplotter
affy
affyio
13.4 years ago
Johnstone, Alice
• 410
• updated 13.4 years ago
Mark Dunning
• 320
0
Votes
3
Replies
885
Views
beadarray package: problem with bead level data
geneplotter
affy
affyio
beadarray
quantsmooth
beadarraySNP
geneplotter
affy
affyio
13.5 years ago
Krys Kelly
• 270
• updated 13.5 years ago
Mike Smith
• 40
0
Votes
1
Reply
655
Views
beadarray readIllumina suggestions
Microarray
Annotation
geneplotter
affy
affyio
beadarray
quantsmooth
beadarraySNP
affy
13.6 years ago
Keith James
• 10
• updated 13.6 years ago
Matt Ritchie
• 460
10 results • Page
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Comment: Conc_1 in differnet dba.report result is slightly different
by
shangguandong1996
• 20
I use `as_tibble` to convert `Grange` objecet, and then use write_csv. The basic command is like below ``` # I have to admit this examp…
Answer: Limma help (creating design matrix)
by
James W. MacDonald
55k
There's no need to do the second line in your example. The limma package is quite happy to accept an `ExpressionSet` as input, so you don't…
Answer: Rhdf5lib installation problem
by
Mike Smith
♦ 4.8k
Thanks for the details. The error occurs at the following step: ``` ../libtool: line 7486: cd: -/: invalid option ``` and I think …
Comment: Normalization for two bulk RNA datasets with different library sizes
by
Michael Love
31k
Given that tissues are nested within dataset, and you are interested in looking at time differences within tissue, I'd recommend processing…
Comment: Normalization for two bulk RNA datasets with different library sizes
by
K.
• 0
I would like to retrieve a list of target genes in all tissues after certain pathway activation to evaluate to what extent are the target g…
Votes
Answer: Limma help (creating design matrix)
Comment: Normalization for two bulk RNA datasets with different library sizes
How to better design a Volcano plot
Replace a specific nucleotide sequence, at a specific position, with another in Biostrings
Comment: How to better design a Volcano plot
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ilysR
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Sophie Marion de Proce
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jol.espinoz
• 30
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jol.espinoz
• 30
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jma1991
• 40
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WEHI, Melbourne, Australia,
3 minutes ago
EMBL Heidelberg / de.NBI,
4 minutes ago
Germany,
8 minutes ago
The city by the bay,
55 minutes ago
EMBL European Molecular Biology Laboratory,
1 hour ago
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