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sigpathway
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master gene list for pathway analysis
pathway analysis
sigpathway
Genesets_EntrezGeneIDs.RData
2.3 years ago
maria
• 0
0
Votes
4
Replies
1.4k
Views
PANTHER in R.... Gene lists in sigPathway?
sigPathway
sigPathway
8.7 years ago
Voke AO
• 760
0
Votes
2
Replies
1.3k
Views
help in downloading some packages.
goTools
sigPathway
topGO
goTools
sigPathway
topGO
10.3 years ago
Veerendra GP
• 100
• updated 10.3 years ago
Michael Dondrup
• 550
0
Votes
0
Replies
582
Views
computer out of memory when using sigpathway
Microarray
Annotation
sigPathway
Microarray
Annotation
sigPathway
10.7 years ago
山中程
• 10
0
Votes
0
Replies
422
Views
sigpathway pheno object
sigPathway
sigPathway
11.6 years ago
Adrian Johnson
• 330
0
Votes
0
Replies
457
Views
sigPathway on Agilent data
sigPathway
sigPathway
12.6 years ago
Srinivas Iyyer
• 590
0
Votes
3
Replies
447
Views
How can I make genesets for sigpathway
sigPathway
sigPathway
12.9 years ago
Srinivas Iyyer
• 590
• updated 12.9 years ago
James W. MacDonald
55k
7 results • Page
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Answer: Limma help (creating design matrix)
by
James W. MacDonald
55k
There's no need to do the second line in your example. The limma package is quite happy to accept an `ExpressionSet` as input, so you don't…
Answer: Rhdf5lib installation problem
by
Mike Smith
♦ 4.8k
Thanks for the details. The error occurs at the following step: ``` ../libtool: line 7486: cd: -/: invalid option ``` and I think …
Comment: Normalization for two bulk RNA datasets with different library sizes
by
Michael Love
31k
Given that tissues are nested within dataset, and you are interested in looking at time differences within tissue, I'd recommend processing…
Comment: Normalization for two bulk RNA datasets with different library sizes
by
K.
• 0
I would like to retrieve a list of target genes in all tissues after certain pathway activation to evaluate to what extent are the target g…
Answer: Normalization for two bulk RNA datasets with different library sizes
by
Michael Love
31k
What is the comparison of interest?
Votes
Answer: Limma help (creating design matrix)
Comment: Normalization for two bulk RNA datasets with different library sizes
How to better design a Volcano plot
Replace a specific nucleotide sequence, at a specific position, with another in Biostrings
Comment: How to better design a Volcano plot
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EMBL European Molecular Biology Laboratory,
24 minutes ago
The city by the bay,
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WEHI, Melbourne, Australia,
4 hours ago
Argentina, Rosario (Universidad Nacional de Rosario),
6 hours ago
EMBL Heidelberg / de.NBI,
7 hours ago
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