Valerie Obenchain ♦ 6.7k
Status: New
Handle: @valerie-obenchain-4275
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Joined: 10.4 years ago
Last seen: 15 months ago
Location: United States

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Answer: A: Should GenomicAlignments::mapToAlignments() terminate when no alignments are fou
15 months ago
Valerie Obenchain ♦ 6.7k
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186
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Comment: C: Should GenomicAlignments::mapToAlignments() terminate when it no alignments are
15 months ago
Valerie Obenchain ♦ 6.7k
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305
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Answer: A: Error in VCF parsing with VariantAnnotation
23 months ago
Valerie Obenchain ♦ 6.7k
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291
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Comment: C: VariantAnnotation fails to load VCF record
2.1 years ago
Valerie Obenchain ♦ 6.7k
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714
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News: Bioconductor 3.8 is released
bioconductor news release News
2.3 years ago
Valerie Obenchain ♦ 6.7k • updated 2.2 years ago
restat110 • 0
2
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345
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Answer: A: Bug in follow and precede
2.2 years ago
Valerie Obenchain ♦ 6.7k
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252
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Answer: A: writeVcf save invalid vcf with metadata out of order
2.3 years ago
Valerie Obenchain ♦ 6.7k
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447
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Answer: A: Problem installing CRISPRseek
2.4 years ago
Valerie Obenchain ♦ 6.7k
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833
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Comment: C: Trying to map nucleotide position from a transcript to genomic location
2.4 years ago
Valerie Obenchain ♦ 6.7k
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434
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Comment: C: Nearest genomic ranges and distances in circular ranges
2.4 years ago
Valerie Obenchain ♦ 6.7k
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1
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719
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Answer: A: Data from ##SAMPLE lines in VCF?
2.4 years ago
Valerie Obenchain ♦ 6.7k
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719
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Comment: C: Data from ##SAMPLE lines in VCF?
2.4 years ago
Valerie Obenchain ♦ 6.7k
1
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370
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News: BioC 3.8 release schedule
bioconductor release news News
2.4 years ago
Valerie Obenchain ♦ 6.7k
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833
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Answer: A: Trying to map nucleotide position from a transcript to genomic location
2.4 years ago
Valerie Obenchain ♦ 6.7k
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672
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Comment: C: getPromoterSeq error "Error in value[[3L]](cond) : record 1 (1:-XXXX-XXX) was t
2.5 years ago
Valerie Obenchain ♦ 6.7k
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434
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Comment: C: Nearest genomic ranges and distances in circular ranges
2.5 years ago
Valerie Obenchain ♦ 6.7k
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676
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Comment: C: ExperimentHub wackiness (which breaks packages that depend upon experimentHub-pr
2.5 years ago
Valerie Obenchain ♦ 6.7k
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1
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434
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Answer: A: Nearest genomic ranges and distances in circular ranges
2.6 years ago
Valerie Obenchain ♦ 6.7k
1
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1
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434
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Comment: C: Get rs numbers using IntronVariants() in VariantAnnotation, locateVariants
2.6 years ago
Valerie Obenchain ♦ 6.7k
1
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1
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749
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Comment: C: Error with R package motifbreakR while trying to read a vcf file with snps.from.
2.6 years ago
Valerie Obenchain ♦ 6.7k
2
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1
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434
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Answer: A: Get rs numbers using IntronVariants() in VariantAnnotation, locateVariants
2.6 years ago
Valerie Obenchain ♦ 6.7k
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634
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Answer: A: nearest without overlapping
2.7 years ago
Valerie Obenchain ♦ 6.7k
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412
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Answer: A: Error: invalid class "VRanges" object
2.7 years ago
Valerie Obenchain ♦ 6.7k
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1
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411
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Answer: A: cram for new chips
2.7 years ago
Valerie Obenchain ♦ 6.7k
1
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749
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Answer: A: Error with R package motifbreakR while trying to read a vcf file with snps.from.
2.7 years ago
Valerie Obenchain ♦ 6.7k
0
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1
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391
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Answer: A: filtering a VCF file based on genotype
2.8 years ago
Valerie Obenchain ♦ 6.7k
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4
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1.1k
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News: Bioconductor 3.7 is released
bioconductor release News
2.8 years ago
Valerie Obenchain ♦ 6.7k • updated 2.8 years ago
funnyjokes1.com • 0
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498
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Comment: C: Bioconductor Cloud AMI - How to Access Microarray Files Stored in Amazon S3 Buck
2.8 years ago
Valerie Obenchain ♦ 6.7k
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398
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Answer: A: counting reads with muliple hits with SummarizeOverlaps
2.9 years ago
Valerie Obenchain ♦ 6.7k
2
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1
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371
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Answer: A: How to write a preprocess.reads function for summarizeOverlaps that requires dif
2.9 years ago
Valerie Obenchain ♦ 6.7k
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343
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Answer: A: GenomicRanges distanceToNearest: trouble replicating snp-gene mapping from older
2.9 years ago
Valerie Obenchain ♦ 6.7k
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373
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News: Bioconductor 3.7 release schedule
bioconductor news release News
2.9 years ago
Valerie Obenchain ♦ 6.7k
0
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0
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538
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Comment: C: GenomicFeatures: could not find symbol "recursive" in environment of the generic
2.9 years ago
Valerie Obenchain ♦ 6.7k
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406
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Comment: C: Error in installation of Bioconductor package
3.0 years ago
Valerie Obenchain ♦ 6.7k
1
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491
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Answer: A: How to operate on circular sequences with GenomicRanges?
3.0 years ago
Valerie Obenchain ♦ 6.7k
0
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1
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307
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Answer: A: Minimum overlap for reads to be counted in summarizeoverlaps
3.0 years ago
Valerie Obenchain ♦ 6.7k
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1.9k
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Answer: A: GRanges::distanceToNearest does not return distance to nearest
3.2 years ago
Valerie Obenchain ♦ 6.7k
2
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1
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495
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Answer: A: [VariantAnnotation] Preserve query metadata with locateVariants()
3.2 years ago
Valerie Obenchain ♦ 6.7k
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1.9k
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Comment: C: GRanges::distanceToNearest does not return distance to nearest
3.2 years ago
Valerie Obenchain ♦ 6.7k
0
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0
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475
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Answer: A: Issues installing "CardinalWorkflows"
3.2 years ago
Valerie Obenchain ♦ 6.7k
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482
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Comment: C: 403 Forbidden During Install
3.3 years ago
Valerie Obenchain ♦ 6.7k
0
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1
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482
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Answer: A: 403 Forbidden During Install
3.3 years ago
Valerie Obenchain ♦ 6.7k
5
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3.0k
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News: Bioconductor Package Archives
bioconductor archive news News
3.3 years ago
Valerie Obenchain ♦ 6.7k
5
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0
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498
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News: Bioconductor 3.6 is released
bioconductor news release News
3.3 years ago
Valerie Obenchain ♦ 6.7k
0
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2
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438
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News: Bioconductor 3.6 release: 3.6 branch created
bioconductor release News
3.3 years ago
Valerie Obenchain ♦ 6.7k
0
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539
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News: Bioconductor 3.6 release: stop commits to git.bioconductor.org
bioconductor release News
3.3 years ago
Valerie Obenchain ♦ 6.7k
0
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0
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413
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News: Bioconductor 3.6 release
bioconductor news release News
3.4 years ago
Valerie Obenchain ♦ 6.7k
1
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897
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Comment: C: Error in columns(org.Hs.eg.db) : could not find function "columns"
3.5 years ago
Valerie Obenchain ♦ 6.7k
1
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1
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530
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Answer: A: Not getting the expected answers from GenomicRanges follow/precede
3.5 years ago
Valerie Obenchain ♦ 6.7k
3
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1
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766
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Answer: A: SNP location annotation problem in "VariantAnnotation" package
3.5 years ago
Valerie Obenchain ♦ 6.7k
830 results • Page 1 of 17
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