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Aaron Lun20k
Cambridge, United Kingdom
For: A: Understanding contrasts limma
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Aaron Lun20k
Cambridge, United Kingdom
For: A: limma batch question
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12 months ago to
Aaron Lun20k
Cambridge, United Kingdom
For: A: Allele Specific Expression in DESeq2 or EdgeR
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12 months ago to
Aaron Lun20k
Cambridge, United Kingdom
For: A: Is Limma's removeBatchEffect() and log2() commutative?
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12 months ago to
Aaron Lun20k
Cambridge, United Kingdom
For: A: Continuous variable interaction with Groups in design matrix
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12 months ago to
Aaron Lun20k
Cambridge, United Kingdom
For: A: voom with combat
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12 months ago to
Aaron Lun20k
Cambridge, United Kingdom
For: A: limma Time Course Experiment with many time points
gravatar for Gordon Smyth
12 months ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Why different filtering criteria using CPM to filter the RNA-seq count data in e
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12 months ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: Differences between limma voom E values and edgeR cpm values?
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12 months ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: RNA-Seq, generate batch-free count matrix
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12 months ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Do the outputs of Limma's competitive gene set methods (camera, romer) require a
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12 months ago to
Michael Love18k
United States
For: A: DESeq2 Model Design
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12 months ago to
Michael Love18k
United States
For: A: deseq2 filter the low counts
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12 months ago to
Mike Smith2.8k
EMBL Heidelberg / de.NBI
For: A: R: error while reading .h5 files from R using rdhf5 package
gravatar for Ryan C. Thompson
12 months ago to
The Scripps Research Institute, La Jolla, CA
For: A: Batch correction in DESeq2
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13 months ago to
Assa Yeroslaviz1.4k
Munich, Germany
For: A: Problem with biomart's listMarts function
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14 months ago to
Michael Love18k
United States
For: A: DESeq2 Model Design
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15 months ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
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17 months ago to
Aaron Lun20k
Cambridge, United Kingdom
For: A: limma Time Course Experiment with many time points
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19 months ago to
Simon Anders3.5k
Zentrum für Molekularbiologie, Universität Heidelberg
For: A: DEXSeq Usage and Expression Confusion
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2.2 years ago to
Assa Yeroslaviz1.4k
Munich, Germany
For: A: Problem with biomart's listMarts function
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2.2 years ago to
Thomas Girke1.6k
United States
For: A: heatmap.2() get matrix after hierarchical clustering
gravatar for Gordon Smyth
2.2 years ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: voom for spectral counts
gravatar for Gordon Smyth
2.2 years ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Do the outputs of Limma's competitive gene set methods (camera, romer) require a
gravatar for Gordon Smyth
2.2 years ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
gravatar for Ryan C. Thompson
2.2 years ago to
The Scripps Research Institute, La Jolla, CA
For: A: Using multiple tools for differential gene expression analysis as validation
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2.3 years ago to
Bernd Fischer540
Germany / Heidelberg / DKFZ
For: A: voom for spectral counts
gravatar for Gordon Smyth
2.6 years ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
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2.7 years ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
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2.7 years ago to
United States
For: A: Limma Model Design Question
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2.7 years ago to
hygine140
beijing
For: A: biomaRt no longer works with proxy after upgrade
gravatar for Gordon Smyth
2.7 years ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
gravatar for Aaron Lun
2.7 years ago to
Aaron Lun20k
Cambridge, United Kingdom
For: A: limma Time Course Experiment with many time points
gravatar for Gordon Smyth
2.8 years ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: voom for spectral counts
gravatar for Gordon Smyth
2.8 years ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
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3.1 years ago to
Dan Tenenbaum ♦♦ 8.2k
United States
For: A: What is the best way to get help on Bioconductor packages?
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3.2 years ago to
Martin Morgan ♦♦ 22k
United States
For: A: Mapping genome regions to gene symbols
gravatar for Gordon Smyth
3.3 years ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
gravatar for Simon Anders
3.4 years ago to
Simon Anders3.5k
Zentrum für Molekularbiologie, Universität Heidelberg
For: A: DEXSeq Usage and Expression Confusion
gravatar for Gordon Smyth
3.5 years ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
gravatar for Gordon Smyth
3.8 years ago to
Gordon Smyth34k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC

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