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6 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: goana limma- extract list of DE genes and genes in the enriched GO terms?
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6 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Is Limma's removeBatchEffect() and log2() commutative?
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3 months ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Continuous variable interaction with Groups in design matrix
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3 months ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Is Limma's removeBatchEffect() and log2() commutative?
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3 months ago to
Michael Love19k
United States
For: A: DESeq2 1.20.0 lfcshrink function
gravatar for Aaron Lun
15 months ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: voom with combat
gravatar for Aaron Lun
15 months ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: limma batch question
gravatar for Aaron Lun
15 months ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Allele Specific Expression in DESeq2 or EdgeR
gravatar for Aaron Lun
15 months ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Is Limma's removeBatchEffect() and log2() commutative?
gravatar for Aaron Lun
15 months ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Continuous variable interaction with Groups in design matrix
gravatar for Aaron Lun
15 months ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: limma Time Course Experiment with many time points
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15 months ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Understanding contrasts limma
gravatar for Gordon Smyth
15 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Do the outputs of Limma's competitive gene set methods (camera, romer) require a
gravatar for Gordon Smyth
15 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: RNA-Seq, generate batch-free count matrix
gravatar for Gordon Smyth
15 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: Differences between limma voom E values and edgeR cpm values?
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15 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Why different filtering criteria using CPM to filter the RNA-seq count data in e
gravatar for Michael Love
15 months ago to
Michael Love19k
United States
For: A: deseq2 filter the low counts
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15 months ago to
Michael Love19k
United States
For: A: DESeq2 Model Design
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15 months ago to
Mike Smith2.9k
EMBL Heidelberg / de.NBI
For: A: R: error while reading .h5 files from R using rdhf5 package
gravatar for Ryan C. Thompson
15 months ago to
The Scripps Research Institute, La Jolla, CA
For: A: Batch correction in DESeq2
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15 months ago to
Assa Yeroslaviz1.4k
Munich, Germany
For: A: Problem with biomart's listMarts function
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16 months ago to
Michael Love19k
United States
For: A: DESeq2 Model Design
gravatar for Gordon Smyth
17 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
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20 months ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: limma Time Course Experiment with many time points
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21 months ago to
Simon Anders3.5k
Zentrum für Molekularbiologie, Universität Heidelberg
For: A: DEXSeq Usage and Expression Confusion
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2.4 years ago to
Assa Yeroslaviz1.4k
Munich, Germany
For: A: Problem with biomart's listMarts function
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2.4 years ago to
Thomas Girke1.6k
United States
For: A: heatmap.2() get matrix after hierarchical clustering
gravatar for Gordon Smyth
2.4 years ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
gravatar for Gordon Smyth
2.4 years ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Do the outputs of Limma's competitive gene set methods (camera, romer) require a
gravatar for Gordon Smyth
2.4 years ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: voom for spectral counts
gravatar for Ryan C. Thompson
2.4 years ago to
The Scripps Research Institute, La Jolla, CA
For: A: Using multiple tools for differential gene expression analysis as validation
gravatar for Bernd Fischer
2.5 years ago to
Bernd Fischer540
Germany / Heidelberg / DKFZ
For: A: voom for spectral counts
gravatar for Gordon Smyth
2.7 years ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
gravatar for Gordon Smyth
2.8 years ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
gravatar for James W. MacDonald
2.8 years ago to
United States
For: A: Limma Model Design Question
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2.9 years ago to
hygine140
beijing
For: A: biomaRt no longer works with proxy after upgrade
gravatar for Gordon Smyth
2.9 years ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
gravatar for Aaron Lun
2.9 years ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: limma Time Course Experiment with many time points
gravatar for Gordon Smyth
2.9 years ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC
gravatar for Gordon Smyth
2.9 years ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: voom for spectral counts
gravatar for Dan Tenenbaum
3.3 years ago to
Dan Tenenbaum ♦♦ 8.2k
United States
For: A: What is the best way to get help on Bioconductor packages?
gravatar for Martin Morgan
3.4 years ago to
Martin Morgan ♦♦ 22k
United States
For: A: Mapping genome regions to gene symbols
gravatar for Gordon Smyth
3.5 years ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Confidence intervals on edgeR logFC

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