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gravatar for Gordon Smyth
6 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: nestedF in decideTests: an analogue of Anova with post-hoc t-tests?
gravatar for Gordon Smyth
6 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Analysis of pathways using edgeR
gravatar for Gordon Smyth
6 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Why different filtering criteria using CPM to filter the RNA-seq count data in e
gravatar for Gordon Smyth
6 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: ANOVA-like test via treat() in limma
gravatar for Gordon Smyth
6 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Trouble with Tximport for edgeR
gravatar for shepherl
6 weeks ago to
shepherl ♦♦ 830
United States
For: A: Is there any annotation package for MSEA?
gravatar for Michael Love
6 weeks ago to
Michael Love19k
United States
For: A: How does DESeq2 handle zero counts in one condition?
gravatar for Michael Love
6 weeks ago to
Michael Love19k
United States
For: A: DESeq2 baseMean values for each sample
gravatar for Aaron Lun
6 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: applying voom + limma to a block factor design in RNA-seq experiment
gravatar for Aaron Lun
6 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Filtering for ATAC-seq
gravatar for Aaron Lun
6 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Building contrasts for combined treatment groups to compare to a control
gravatar for James W. MacDonald
6 weeks ago to
United States
For: A: Retrieving all genes related a go term
gravatar for Ryan C. Thompson
6 weeks ago to
The Scripps Research Institute, La Jolla, CA
For: A: Voom transformation from counts and normalization to negative values
gravatar for Valerie Obenchain
6 weeks ago to
Valerie Obenchain ♦♦ 6.6k
United States
For: A: about collapsed and expanded vcf file
gravatar for Guangchuang Yu
10 weeks ago to
Guangchuang Yu1.0k
China/Guangzhou/Southern Medical University
For: A: How to do simple Fisher' exact test for overlapped genomic interval in R?
gravatar for Aaron Lun
10 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Representvie gene expression value in one condition with several replicates
gravatar for Aaron Lun
10 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Filtering for ATAC-seq
gravatar for Aaron Lun
10 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Paired factorial design model in limma
gravatar for Aaron Lun
10 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: edgeR normalisation factors different between experimental groups
gravatar for Aaron Lun
10 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: applying voom + limma to a block factor design in RNA-seq experiment
gravatar for Aaron Lun
10 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Building contrasts for combined treatment groups to compare to a control
gravatar for Michael Love
10 weeks ago to
Michael Love19k
United States
For: A: How does DESeq2 handle zero counts in one condition?
gravatar for Michael Love
10 weeks ago to
Michael Love19k
United States
For: A: DESeq2 baseMean values for each sample
gravatar for Michael Love
10 weeks ago to
Michael Love19k
United States
For: A: DESeq2 why estimate dispersion on log scale
gravatar for Michael Love
10 weeks ago to
Michael Love19k
United States
For: A: What doest this p.value distribution mean?
gravatar for Gordon Smyth
10 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Why different filtering criteria using CPM to filter the RNA-seq count data in e
gravatar for Gordon Smyth
10 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Analysis of pathways using edgeR
gravatar for Gordon Smyth
10 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: ANOVA-like test via treat() in limma
gravatar for Hervé Pagès
10 weeks ago to
Hervé Pagès ♦♦ 13k
United States
For: A: Extracting Coordinates of startcodon from Grangeslist
gravatar for Ryan C. Thompson
10 weeks ago to
The Scripps Research Institute, La Jolla, CA
For: A: What's the relationship between "design" and "contrasts"?
gravatar for Simon Anders
10 weeks ago to
Simon Anders3.5k
Zentrum für Molekularbiologie, Universität Heidelberg
For: A: P values from Deseq Analysis
gravatar for jaro.slamecka
3 months ago to
jaro.slamecka130
Mitchell Cancer Institute, Mobile AL, USA
For: A: Microarray analysis of .adat files to identify degs
gravatar for Laurent Gatto
4 months ago to
Laurent Gatto1.0k
United Kingdom
For: A: Does OnDiskMSnExp rewrite original data
gravatar for Gordon Smyth
4 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Analysis of pathways using edgeR
gravatar for Gordon Smyth
4 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: ANOVA-like test via treat() in limma
gravatar for Gordon Smyth
4 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Nanostring analysis with limma
gravatar for Gordon Smyth
4 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Trouble with Tximport for edgeR
gravatar for Gordon Smyth
4 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: using duplicateCorrelation with limma+voom for RNA-seq data
gravatar for Gordon Smyth
4 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Using limma to model gene expression changes with age
gravatar for Gordon Smyth
4 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Representvie gene expression value in one condition with several replicates
gravatar for Gordon Smyth
4 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Subsetting ELists and Applying sva to Iterative Differential Gene Expression Tes
gravatar for Gordon Smyth
4 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Why different filtering criteria using CPM to filter the RNA-seq count data in e
gravatar for Lluís Revilla Sancho
4 months ago to
European Union
For: A: Where can I use the VSN source code in C++?
gravatar for Aaron Lun
4 months ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Filtering for ATAC-seq

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