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Awarded 2068 times for: created an answer that has been accepted

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gravatar for thokall
6 weeks ago to
thokall120
Swedish Museum of Natural History
For: A: Using R for EnrichR analysis
gravatar for Gordon Smyth
6 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: another contrast question - edgeR + scRNA-seq + timecourse
gravatar for Gordon Smyth
6 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: How to plot MD plot in limma
gravatar for Gordon Smyth
6 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Why different filtering criteria using CPM to filter the RNA-seq count data in e
gravatar for Gordon Smyth
6 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Building linear model (age effect on gene expression)
gravatar for Gordon Smyth
6 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: ANOVA-like test via treat() in limma
gravatar for shepherl
6 weeks ago to
shepherl ♦♦ 830
United States
For: A: survcomp package - censor missing
gravatar for Mike Smith
6 weeks ago to
Mike Smith2.9k
EMBL Heidelberg / de.NBI
For: A: Update from developers branch of bioconductor packages
gravatar for Michael Love
6 weeks ago to
Michael Love19k
United States
For: A: One-sided p-value from DESeq2
gravatar for Michael Love
6 weeks ago to
Michael Love19k
United States
For: A: DESeq2 - Three Sample Analysis
gravatar for Michael Love
6 weeks ago to
Michael Love19k
United States
For: A: DESeq2 on two groups
gravatar for Michael Love
6 weeks ago to
Michael Love19k
United States
For: A: ntop parameter in plotPCA(). DESeq2
gravatar for Aaron Lun
6 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Building contrasts for combined treatment groups to compare to a control
gravatar for Aaron Lun
6 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: applying voom + limma to a block factor design in RNA-seq experiment
gravatar for Aaron Lun
6 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: How to extract genes with greatest BCV?
gravatar for Aaron Lun
6 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: how to calculate the logFC value
gravatar for James W. MacDonald
6 weeks ago to
United States
For: A: BiomaRt returns 0 obs
gravatar for Jiang, Mike
7 weeks ago to
Jiang, Mike1.2k
(Private Address)
For: A: openCyto displaying gating panels
gravatar for Rory Stark
7 weeks ago to
Rory Stark2.6k
CRUK, Cambridge, UK
For: A: MA plot DiffBind in ggplot2
gravatar for jac1318
7 weeks ago to
jac13180
For: A: ballgown bamfiles vector
gravatar for Guangchuang Yu
10 weeks ago to
Guangchuang Yu1.0k
China/Guangzhou/Southern Medical University
For: A: ReactomePA - Pathway analysis for DE porcine genes
gravatar for shepherl
10 weeks ago to
shepherl ♦♦ 830
United States
For: A: survcomp package - censor missing
gravatar for Aaron Lun
10 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: applying voom + limma to a block factor design in RNA-seq experiment
gravatar for Aaron Lun
10 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: how to calculate the logFC value
gravatar for Aaron Lun
10 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: Building contrasts for combined treatment groups to compare to a control
gravatar for Aaron Lun
10 weeks ago to
Aaron Lun21k
Cambridge, United Kingdom
For: A: How to extract genes with greatest BCV?
gravatar for James W. MacDonald
10 weeks ago to
United States
For: A: Retrieving all genes related a go term
gravatar for James W. MacDonald
10 weeks ago to
United States
For: A: Bioconductor: quantile normalization
gravatar for James W. MacDonald
10 weeks ago to
United States
For: A: blastn for selected database and/or organism
gravatar for James W. MacDonald
10 weeks ago to
United States
For: A: BiomaRt returns 0 obs
gravatar for Michael Love
10 weeks ago to
Michael Love19k
United States
For: A: DESeq2 - Three Sample Analysis
gravatar for Michael Love
10 weeks ago to
Michael Love19k
United States
For: A: DESeq2 on two groups
gravatar for Michael Love
10 weeks ago to
Michael Love19k
United States
For: A: Post-processing RNA-Seq after tximport
gravatar for Mike Smith
10 weeks ago to
Mike Smith2.9k
EMBL Heidelberg / de.NBI
For: A: Update from developers branch of bioconductor packages
gravatar for Martin Morgan
10 weeks ago to
Martin Morgan ♦♦ 22k
United States
For: A: Difficulty extending ExpressionSet
gravatar for Gordon Smyth
10 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: How to plot MD plot in limma
gravatar for Gordon Smyth
10 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: another contrast question - edgeR + scRNA-seq + timecourse
gravatar for Gordon Smyth
10 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Why different filtering criteria using CPM to filter the RNA-seq count data in e
gravatar for Gordon Smyth
10 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Building linear model (age effect on gene expression)
gravatar for Gordon Smyth
10 weeks ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: ANOVA-like test via treat() in limma
gravatar for Sean Davis
3 months ago to
Sean Davis21k
United States
For: A: Using eset while parsing GSE file located in a path
gravatar for jaro.slamecka
3 months ago to
jaro.slamecka130
Mitchell Cancer Institute, Mobile AL, USA
For: A: Gene expression differential analysis using TCGA dataset
gravatar for Gordon Smyth
4 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Limma - how to manage huge differences in library sizes
gravatar for Gordon Smyth
4 months ago to
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
For: A: Performing differential gene analysis on RT PCR experimental data

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