Apologies for my ignorance as I am still an R amateur. Currently, I am trying to access a GEO dataset using the sample code that is computed via GEO2R. However, I stumble upon issues already on line 1 with the error message below:
gset <- getGEO("GSE13995", GSEMatrix =TRUE, AnnotGPL=FALSE) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE13nnn/GSE13995/matrix/ Found 2 file(s) GSE13995-GPL7752_series_matrix.txt.gz Using locally cached version: /var/folders/58/cm6szd7s045g4z6dbtqzdyh80000gn/T//RtmpzJ4fko/GSE13995-GPL7752_series_matrix.txt.gz Using locally cached version of GPL7752 found here: /var/folders/58/cm6szd7s045g4z6dbtqzdyh80000gn/T//RtmpzJ4fko/GPL7752.soft Error in read.table(con, sep = "\t", header = FALSE, nrows = nseries) : invalid 'nlines' argument
Some help would be greatly appreciated. Thank you in advance!