Question: question about "write.fit" function in limma-voom
0
gravatar for aec
2.0 years ago by
aec50
aec50 wrote:

Dear all,

Anybody knows how to extract the write.fit table with method="nestedF" ? the function only gives option for method="separate" or "global".

Thanks,

limma write.fit method nestedf • 297 views
ADD COMMENTlink modified 17 months ago by Gordon Smyth39k • written 2.0 years ago by aec50
Answer: question about "write.fit" function in limma-voom
0
gravatar for Gordon Smyth
17 months ago by
Gordon Smyth39k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
Gordon Smyth39k wrote:
results <- decideTests(fit, method="nestedF")
write.fit(fit, results)

Note that nestedF is not a p-value adjustment method, so it cannot be an option for the "method" argument of write.fit.

ADD COMMENTlink written 17 months ago by Gordon Smyth39k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 407 users visited in the last hour