interGeneCorrelation and voom
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maltethodberg ▴ 170
@maltethodberg-9690
Last seen 7 days ago
Denmark

I'm looking at using interGeneCorrelation to calculate correlation between sets of genes for RNA-Seq data. camera can take weights obtained via voom into account, but I was surprised to see that camera does not actually call interGeneCorrelation to do this. As the interGeneCorrelation function itself does not accepts any weights, what is the best way to use interGeneCorrelation in conjunction with voom?

 

voom interGeneCorrelation limma • 679 views
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