Question: visualize CNV data based on WGS
gravatar for Bogdan
23 months ago by
Palo Alto, CA, USA
Bogdan580 wrote:

Dear all,

we have been calling CNV (copy-number variations) in cancer genomes based on whole-genome sequencing data (WGS), using some of the packages available in BioC.

Please would you advise -- what would be the best way to visualize WGS in order inspect visually the CNV predictions ?

Is there any package in BioC where visualization is easier ? The BAM files of germline and tumor samples are big (> 60-80 GB)..

thanks a lot !

-- bogdan

cnv • 290 views
ADD COMMENTlink written 23 months ago by Bogdan580
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 220 users visited in the last hour