I am trying to use ChAMP to analyse the data from 2 microarray chips (Illumina Infinium EPIC arrays), however, I get this error message:
Loading data from ../chips
[read.metharray.sheet] Found the following CSV files:
Error: !anyDuplicated(basenames) is not TRUE
This is the code I used to load my data into ChAMP:
I am very new to using Bioconductor/ChAMP, so am unsure what to do to rectify this in order to load my data..
Any help would be greatly appreciated!