problems with using cummeRbund
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sneha108ss • 0
@sneha108ss-14817
Last seen 4.7 years ago

Hi,

I have the output files from cufflinks which I am now trying to analyze using cummeRbund for differential splicing, but I have trouble importing my data. 

I used the following code:

> cuff <- readcufflinks()

> cuff

CuffSet instance with:

0 samples

0 genes

0 isoforms

0 TSS

0 CDS

0 promoters

0 splicing

0 relCDS

Could you please tell me what the problem is.

PS The output files are not empty

cummerbund • 521 views
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