index of probes in Illumina Infinium MethylationEPIC BeadChip
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mcarmel • 0
@mcarmel-14827
Last seen 6.3 years ago

Hi

After using the Illumina Infinium MethylationEPIC BeadChip, differentially methylated blocks (DMB) were calculated by ChAMP R pipeline by the method named block finder.

In the results I have a column with indexStart and indexEnd.

I wonder if there is an index of probes from the Illumina Infinium MethylationEPIC BeadChip, in order to determine the exact genomic loci of the block?

Thanks

Miri

probe • 973 views
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Can you clarify? You have stated that the output includes the start and end of the block, so it's not clear what you want if not that.

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