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Hi all,.
I am trying to get clinical data from cbioportal using cgdsr.
I get a error when I do the following command to get clinical data of TCGA bladder study, however it works well for lung study.
myclinicaldata <- getClinicalData(mycgds, "blca_tcga_all") Error in scan(file = file, what = what, sep = sep, quote = quote, dec = dec, : line 284 did not have 91 elements myclinicaldata <- getClinicalData(mycgds, "lusc_tcga_all") dim(myclinicaldata) [1] 504 77
Any help would be greatly appreciated.
Yusuke