Question: DESeqDataSetFromHTSeq -- function not found
0
gravatar for brynnhvoy
11 months ago by
brynnhvoy0
brynnhvoy0 wrote:

I am trying to run use DESeqDataSetFromHTSeq to generate the count matrix, but I get the error that this function is not found.  

software error • 182 views
ADD COMMENTlink modified 11 months ago by James W. MacDonald49k • written 11 months ago by brynnhvoy0
Answer: DESeqDataSetFromHTSeq -- function not found
0
gravatar for James W. MacDonald
11 months ago by
United States
James W. MacDonald49k wrote:

This usually means that you haven't loaded the package that contains the function. But using the Bioconductor code search, and looking at the pdf help for both DESeq and DESeq2 indicates that this function doesn't actually exist in any Bioconductor package.

Also please note that it would have been helpful for you to say what package you are attempting to use. And using a tag of 'software error' is not useful, because that's not inherently meaningful and almost surely inaccurate.

ADD COMMENTlink written 11 months ago by James W. MacDonald49k
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