affymetrix miRNA microarray analysis, (package mirna30cdf)
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@englishserver-15152
Last seen 23 months ago
Iran

Hi every one!

miRNA 3.0 CDF Library FileĀ  is present at affymetrix site

However, while I want to use affy (not oligo) for analysis of this type of array, I get the error that mirna30cdf not available. Any help would be appreciated.

microarray affy • 995 views
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@james-w-macdonald-5106
Last seen 1 hour ago
United States

You cannot use the affy package for analysis of this array, because it re-uses the same probes for multiple probesets. The only way to analyze this array is to use oligo. Is there some reason you don't want to do so?

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Thank you indeed very much.

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