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Question: Support for BSgenomeViews objects in matchPWM
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gravatar for s1437643
5 months ago by
s14376430
s14376430 wrote:

Would it be possible to add a method for BSgenomeViews objects in the matchPWM function? The manual says it can take ordinary Views objects, but I don't see any support for BSgenomeViews objects?

Error in (function (classes, fdef, mtable)  : 
  unable to find an inherited method for function ‘matchPWM’ for signature ‘"BSgenomeViews"’
ADD COMMENTlink modified 5 months ago • written 5 months ago by s14376430

You might consider opening an issue for this on the github issues page for this package Biostrings.

ADD REPLYlink modified 5 months ago • written 5 months ago by shepherl ♦♦ 830

Thank you for the suggestion. I've just opened an issue.

ADD REPLYlink written 5 months ago by s14376430
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