Question: Support for BSgenomeViews objects in matchPWM
gravatar for s1437643
7 days ago by
s14376430 wrote:

Would it be possible to add a method for BSgenomeViews objects in the matchPWM function? The manual says it can take ordinary Views objects, but I don't see any support for BSgenomeViews objects?

Error in (function (classes, fdef, mtable)  : 
  unable to find an inherited method for function ‘matchPWM’ for signature ‘"BSgenomeViews"’
ADD COMMENTlink modified 7 days ago • written 7 days ago by s14376430

You might consider opening an issue for this on the github issues page for this package Biostrings.

ADD REPLYlink modified 6 days ago • written 6 days ago by shepherl ♦♦ 590

Thank you for the suggestion. I've just opened an issue.

ADD REPLYlink written 5 days ago by s14376430
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