I recently upgraded to the new Prostar (for proteomics analysis).
Within the gene ontology analysis, it was possible to use genome wide annotation packages you had already installed or at least they were available/searchable during analysis to link up GO numbers etc.
This does not appear to be the case now and i wonder is it a glitch or is it due to recent upgrades to R and some of the connecting packages have dropped a link or something?
My question is how do i contact the package developers to query this or is there something i can do as a novice (comparatively) user?
Any help would be much appreciated.