Question: Remove highly similar terms from a GO gene set enrichment analysis
0
gravatar for jan.soderman
10 months ago by
jan.soderman0 wrote:

Hi,

Can you please suggest a method for removing highly similar GO terms from the gseaResult object produced by the gseGO function of the clusterProfiler package?

When conducting an GO over-representation analysis using the enrichGO function of the same packge there is a simplify function for removing highly similar GO terms from the enrichResult object. I’m unable to find any information on the corresponding function for the gseaResult object.

Many thanks for any help and guidance.

/Jan

will implement the method for gseGO output in future release.

ADD REPLYlink written 10 months ago by Guangchuang Yu1.1k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 357 users visited in the last hour