Question: MethylSig is not giving DMRs with no replicates
0
gravatar for nilaycan
16 months ago by
nilaycan0
nilaycan0 wrote:

Hello all,

I am trying to run MethylSig with my no biological or technical replicate data-sets. In many forums and their manual also, they declared that if you do not have "any replicates", you should use Fisher's exact test instead of t-test. I changed properly all the functions and parameters according to this criteria but I am getting the same error. The error is : Error during wrapup: 'x' must be an array of at least two dimensions. methylSigCalc function causes this error most probably. 

Is it possible that I am doing something wrong or improper? Can anyone give me some idea about this issue?

Thanks in advance,

Nilay

dmr no replicates methylsig • 192 views
ADD COMMENTlink written 16 months ago by nilaycan0
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