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Hi,
I am trying to extract the x and y values from plotDispEsts(dds) plot. Someone know how to do it?
Thanks
LiZ
Hi,
I am trying to extract the x and y values from plotDispEsts(dds) plot. Someone know how to do it?
Thanks
LiZ
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Thank you for the prompt reply.
I read the vignette, "Access to all calculated values" but it is still not clear to me how to get the dispersion values. mcols(dds)$dispGeneEst should give me the dispersion per gene (black dots), right? I would like to highlight some specifics gene in the plot, but the range of values between mcols(dds)$dispGeneEst and what I see in the plot does not match. Thank you again.
The plot uses log=“xy”. Perhaps this is the difference you are seeing?