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Question: I am unable to use Rsubread. Thank you in advance.
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gravatar for swarajgaikwad15
5 weeks ago by
swarajgaikwad150 wrote:

> biocLite("Rsubread")

BioC_mirror: https://bioconductor.org

Using Bioconductor 3.6 (BiocInstaller 1.28.0), R 3.4.0 (2017-04-21).

Installing package(s) ‘Rsubread’

Package which is only available in source form, and may need compilation of C/C++/Fortran: ‘Rsubread’

  These will not be installed

installation path not writeable, unable to update packages: boot, cluster, foreign, MASS, Matrix, mgcv, nlme, rpart, survival

Old packages: 'scales'

Update all/some/none? [a/s/n]: 

a

 

  There is a binary version available but the source version is later:

       binary source needs_compilation

scales  0.5.0  1.0.0              TRUE

 

  Binaries will be installed

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/scales_0.5.0.zip'

Content type 'application/zip' length 694088 bytes (677 KB)

downloaded 677 KB

 

package ‘scales’ successfully unpacked and MD5 sums checked

 

The downloaded binary packages are in

C:\Users\student\AppData\Local\Temp\RtmpkvTKKe\downloaded_packages

> library("Rsubread")

Error in library("Rsubread") : there is no package called ‘Rsubread’

ADD COMMENTlink modified 5 weeks ago by Gordon Smyth35k • written 5 weeks ago by swarajgaikwad150
1
gravatar for Gordon Smyth
5 weeks ago by
Gordon Smyth35k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
Gordon Smyth35k wrote:

Rsubread is only available for Unix and Mac. It is not available for Windows.

ADD COMMENTlink written 5 weeks ago by Gordon Smyth35k

Thank you very much

ADD REPLYlink written 12 hours ago by swarajgaikwad150
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