Question: question about getGEO function
0
gravatar for maryam.sabet
15 months ago by
maryam.sabet0 wrote:

Hi 

When i want to use getGEO function to download GSE dataset with this code:

series <- "GSE85358"
gset <- getGEO(series , GSEMatrix =TRUE, AnnotGPL=TRUE, destdir = "....." )

,i encounter this error:

https://ftp.ncbi.nlm.nih.gov/geo/series/GSE2nnn/GSE2553/matrix/
Error in function (type, msg, asError = TRUE)  : 
  error:1407742E:SSL routines:SSL23_GET_SERVER_HELLO:tlsv1 alert protocol version

how can i fix it?

thanks

geoquery • 384 views
ADD COMMENTlink written 15 months ago by maryam.sabet0

Could you attach the output of `sessionInfo()` after loading GEOquery?

ADD REPLYlink written 13 months ago by Sean Davis21k
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