Querying concentration of a species using hmdbquery
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mahm ▴ 20
@mahm-16884
Last seen 3.0 years ago

Hi All,

I am using hmdbquery to filter the concentration of some of the metabolites documented in HMDB.

I'm referring to the hmdbquery manual that is available here . I'm facing challenge in finding the appropriate command that has to be used to parse the normal concentration of the species ,HMDB0000001, given here.

library(hmdbQuery)
lk1 = HmdbEntry(prefix = "http://www.hmdb.ca/metabolites/",
id = "HMDB0000001")

From, lk1 can we obtain the normal and abnormal concentrations given in the database?

Could someone help?

hmdb hmdbQuery metabolitedata • 308 views