How to extract SNPs from multiple alignment fasta file?
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@pltbiotech_tkarthi-17720
Last seen 2.5 years ago

I am using following scripts to read fasta files

>library(Biostrings)
>dna <- readDNAStringSet("<<PATH TO FASTA FILE>>")

But, further I would like to extract SNPs from these alignment file, but I don't know how extract the SNPs.

Does anyone know?

 

snp multiple sequence alignment fasta Tutorial • 606 views
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