Sva for tumor cellular heterogeneity
0
0
Entering edit mode
chp950 • 0
@chp950-17764
Last seen 2.8 years ago

 

Hi,

We are analyzing tumor expression data, and thought cellular heterogeneity would be a source of unwanted biological variations. We thought to adjust for cellular heterogeneity using sva, however, we noticed the leek method produced different answers compared to the be method. How could one choose how many surrogate variables to include? 

Thanks!

limma sva • 297 views
ADD COMMENT

Login before adding your answer.

Traffic: 512 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6