Question: Obtain GRanges object by gene names
0
gravatar for Arman Shahrisa
12 months ago by
Arman Shahrisa10 wrote:

I want to create a plot to show how desired genes are located across the different chromosomes with IdeoViz. How can I create a GRanges object that includes 24 chromosomes but only genes that I want? The plot needs it as input.

granges gene symbol ideoviz • 281 views
ADD COMMENTlink written 12 months ago by Arman Shahrisa10

What I need is genome information in GRanges. Then I need to subset my desired genes. I would really appreciate any suggestions.

ADD REPLYlink written 12 months ago by Arman Shahrisa10
1

I'm uncertain of your question?  For clarification do you already have the genomic information for the desired genes or this is what you want to find out?

ADD REPLYlink written 12 months ago by shepherl ♦♦ 1.7k
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