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Question: ReportingTools: Error using packet 1 arguments must have same length
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gravatar for mmokrejs
12 days ago by
mmokrejs0
mmokrejs0 wrote:
Hi, I have some output from DESeq2 to be processed by ReportingTools. In thread C: DESeq2: Error using packet 1 arguments must have same length it turned out it is a ReportigTools issue. Would you please comment on this error, visible only in rendered figures?
library(ReportingTools)
desReport <- HTMLReport(shortName = "RNAseq_analysis_with_DESeq",
                        title = "Results of differential expression analysis using DESeq2 (cancer vs. normal)",
                        reportDirectory = "./reports")
publish(res, desReport, DataSet = dds, n = 50, pvalueCutoff = 0.01, lfc = 1,
        make.plots = TRUE, factor = dds$dex)
finish(desReport)
Thank you,
ADD COMMENTlink written 12 days ago by mmokrejs0
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