I hope you are having a good time.
My name is Taha ValizadehAslani. I am a graduate student at EESI lab Drexel University.
We are interested in your software package SigneR, but I have some troubles installing it. My R version 3.5.1. and I am on a windows 7 computer. This is the error that I get when I try to install it.
ERROR: dependencies 'Rcpp', 'later' are not available for package 'httpuv'
* removing 'C:/ProgramData/Anaconda2/envs/mro_env/lib/R/library/httpuv'
In R CMD INSTALL
ERROR: dependencies 'htmlwidgets', 'jsonlite', 'rstudioapi' are not available for package 'r2d3'
* removing 'C:/ProgramData/Anaconda2/envs/mro_env/lib/R/library/r2d3'
In R CMD INSTALL
When I try BiocManager::valid() I get the following messaage:
R version 3.5.1 (2018-07-02)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 7 x64 (build 7601) Service Pack 1
Matrix products: default
 LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252
 LC_MONETARY=English_United States.1252 LC_NUMERIC=C
 LC_TIME=English_United States.1252
attached base packages:
 stats graphics grDevices utils datasets methods base
other attached packages:
 RevoUtils_11.0.1 RevoUtilsMath_11.0.0
loaded via a namespace (and not attached):
 BiocManager_1.30.4 compiler_3.5.1 tools_3.5.1 BiocParallel_1.16.2
Bioconductor version '3.8'
* 6 packages out-of-date
* 2 packages too new
create a valid installation with
"foreach", "mongolite", "packrat", "rbokeh", "rJava", "RJSONIO", "rsconnect",
), update = TRUE, ask = FALSE)
more details: BiocManager::valid()$too_new, BiocManager::valid()$out_of_date
6 packages out-of-date; 2 packages too new
Can you help me with this?